Detailed information    

insolico Bioinformatically predicted

Overview

Name   comN   Type   Machinery gene
Locus tag   O1Q83_RS07155 Genome accession   NZ_CP170642
Coordinates   1464086..1464610 (-) Length   174 a.a.
NCBI ID   WP_132301158.1    Uniprot ID   A0A4R1KZ42
Organism   Lonepinella koalarum strain ACM3666     
Function   type IV pilus biogenesis and function (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1459086..1469610
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  O1Q83_RS07140 (O1Q83_01405) comQ 1462391..1462657 (-) 267 WP_132301152.1 DUF5374 domain-containing protein Machinery gene
  O1Q83_RS07145 (O1Q83_01406) - 1462671..1463357 (-) 687 WP_132301154.1 DUF2572 family protein -
  O1Q83_RS07150 (O1Q83_01407) - 1463358..1464089 (-) 732 WP_132301156.1 hypothetical protein -
  O1Q83_RS07155 (O1Q83_01408) comN 1464086..1464610 (-) 525 WP_132301158.1 prepilin-type N-terminal cleavage/methylation domain-containing protein Machinery gene
  O1Q83_RS07180 (O1Q83_01413) pal 1465448..1465909 (-) 462 WP_132301160.1 peptidoglycan-associated lipoprotein Pal -
  O1Q83_RS07185 (O1Q83_01414) tolB 1465934..1467226 (-) 1293 WP_132301825.1 Tol-Pal system beta propeller repeat protein TolB -
  O1Q83_RS07190 (O1Q83_01415) tolA 1467295..1468488 (-) 1194 WP_132301162.1 cell envelope integrity protein TolA -
  O1Q83_RS07195 (O1Q83_01416) tolR 1468504..1468929 (-) 426 WP_132301164.1 colicin uptake protein TolR -

Sequence

Protein


Download         Length: 174 a.a.        Molecular weight: 20181.31 Da        Isoelectric Point: 7.9612

>NTDB_id=1058288 O1Q83_RS07155 WP_132301158.1 1464086..1464610(-) (comN) [Lonepinella koalarum strain ACM3666]
MKNGFTLVEMMIALLIISMITLISMPAWQSDSQQILIKEQHRLFLFLRQIQARVENSTEIWYLVINRDISQQRWCIAAQR
KSETTCDCFHPHFCPDHLLAQFYYPLSPQKNMIFAKAYYPQKLISFNGTRNSSDSGCFMLQAEQSRTLFAFSNLGRIRLK
SDQAENACNAGVEE

Nucleotide


Download         Length: 525 bp        

>NTDB_id=1058288 O1Q83_RS07155 WP_132301158.1 1464086..1464610(-) (comN) [Lonepinella koalarum strain ACM3666]
ATGAAAAATGGGTTTACTTTGGTTGAAATGATGATAGCTTTATTGATTATCAGTATGATTACCTTAATTAGCATGCCAGC
ATGGCAAAGTGATAGCCAACAAATTCTAATTAAAGAACAGCATCGTTTGTTTCTATTTTTACGTCAAATCCAAGCCAGAG
TGGAAAATTCCACGGAAATTTGGTATCTGGTGATTAATCGTGATATTAGCCAACAACGTTGGTGTATTGCTGCACAGCGT
AAATCAGAAACTACTTGTGATTGTTTTCATCCGCATTTTTGCCCTGATCATCTTTTGGCTCAATTTTATTATCCCTTGAG
CCCACAAAAAAACATGATCTTTGCCAAAGCGTATTATCCACAAAAATTAATCAGTTTTAATGGTACACGCAATTCGTCAG
ATTCAGGTTGCTTTATGTTACAGGCTGAGCAATCTCGAACTTTGTTTGCTTTTTCTAATTTAGGGCGGATTCGCCTAAAA
AGCGATCAAGCAGAGAATGCCTGTAATGCTGGAGTGGAAGAATGA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-24)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4R1KZ42

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comN Haemophilus influenzae Rd KW20

52.353

97.701

0.511

Multiple sequence alignment