Detailed information    

insolico Bioinformatically predicted

Overview

Name   rec2   Type   Machinery gene
Locus tag   O1Q83_RS04045 Genome accession   NZ_CP170642
Coordinates   845064..847451 (+) Length   795 a.a.
NCBI ID   WP_132300438.1    Uniprot ID   A0A4R1KXZ4
Organism   Lonepinella koalarum strain ACM3666     
Function   ssDNA transport through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 840064..852451
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  O1Q83_RS04025 (O1Q83_00790) - 840071..841990 (-) 1920 WP_132300446.1 ABC transporter ATP-binding protein -
  O1Q83_RS04030 (O1Q83_00791) folK 842271..842759 (-) 489 WP_132300444.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  O1Q83_RS04035 (O1Q83_00792) pcnB 842763..844184 (-) 1422 WP_391540696.1 polynucleotide adenylyltransferase PcnB -
  O1Q83_RS04040 (O1Q83_00793) dksA 844302..844748 (-) 447 WP_132300440.1 RNA polymerase-binding protein DksA -
  O1Q83_RS04045 (O1Q83_00794) rec2 845064..847451 (+) 2388 WP_132300438.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  O1Q83_RS04050 (O1Q83_00795) msbA 847512..849260 (+) 1749 WP_132300436.1 lipid A ABC transporter ATP-binding protein/permease MsbA -
  O1Q83_RS04055 (O1Q83_00796) lpxK 849271..850248 (+) 978 WP_132300435.1 tetraacyldisaccharide 4'-kinase -
  O1Q83_RS04060 (O1Q83_00797) kdsB 850245..851018 (+) 774 WP_132300433.1 3-deoxy-manno-octulosonate cytidylyltransferase -
  O1Q83_RS04065 (O1Q83_00798) - 851196..851999 (+) 804 WP_132300431.1 DUF4198 domain-containing protein -

Sequence

Protein


Download         Length: 795 a.a.        Molecular weight: 90721.42 Da        Isoelectric Point: 9.5540

>NTDB_id=1058281 O1Q83_RS04045 WP_132300438.1 845064..847451(+) (rec2) [Lonepinella koalarum strain ACM3666]
MQIILRVINQININTIVYSVILAVISLYFLPTKFLLSWQVCTSLFFIVVILRIVVARKQFVILWLNRALILLVCVGYAHY
FALSALQQAQITPQKVQTMFRIVEIQHQGDYQSLVIETEQPKRRIYTSWKVDQVPRLGEIWQGELQLRPLSSRLNIGGFD
RQTWYFAKDIQAWGTVKSAVKISQDFSWREQRLAHSLVQTQGLTQQGLLLALGFGERAWLHPEIWQRYQQTNTAHLIAIS
GLHIGLAMALGFWLVRVIQYFLPTRKITPILPLCGGVILALLYAQLAGFAIPTLRAILAILIVILLRFYRAYCTAWQLYV
RVVALLLLCDPLMILSTSFWLSIGAVACLILWYQLFPLHLMRWRGLPLSPKVRWIFALFHLQLGLFCLFTPIQLAFFHGF
SLQGFVANLLIVPLYSFLLVPIVLLAVFSHGGFYSWQIANFLADKITDLLSLFQHSWLNLSYLQSLYLNILLAFILWVAL
YKTYGPTQNVANYQQRPPYFSLKSDRSLSPILYNRMQQGLILFILACTTLLCGHYFYRSDWQVETLDVGQGLATLIVKDQ
HGILYDTGASWQGGSMVELEIIPYLQRQGIKLDYVIVSHDDNDHAGGASAIIKMFPDAVFISPSYKNYGENYRGFCKKGE
QWEWQGIKISALSPDTLVQRAENRDSCILLMRQATHTVLLTGDADIAIEQRILSTLSKVEVLQVGHHGSKTSTGINFINK
IKPDIALISSGRWNPWHFPNQGVIERLRQAKSAVYNTAVAGQISVRFYADNTAIVTARNELSPWYQQIIDVQARD

Nucleotide


Download         Length: 2388 bp        

>NTDB_id=1058281 O1Q83_RS04045 WP_132300438.1 845064..847451(+) (rec2) [Lonepinella koalarum strain ACM3666]
ATGCAGATAATTTTAAGAGTAATCAATCAAATAAATATAAATACTATTGTGTATAGCGTTATTTTAGCGGTTATTTCATT
ATATTTTTTACCCACGAAATTTTTATTATCTTGGCAAGTTTGTACGAGTTTATTTTTTATTGTTGTTATATTGCGAATCG
TTGTGGCTAGAAAACAATTCGTTATATTATGGCTAAATAGAGCGTTAATTTTGCTAGTATGTGTTGGTTACGCACATTAC
TTTGCACTGAGTGCCTTGCAACAAGCCCAAATCACACCTCAAAAAGTTCAAACGATGTTTCGTATCGTGGAAATTCAACA
TCAAGGAGATTATCAATCTTTGGTGATAGAAACAGAACAGCCCAAAAGGCGGATTTATACCAGTTGGAAAGTAGATCAGG
TTCCTAGGCTAGGTGAAATTTGGCAAGGTGAATTACAACTTCGACCGCTTTCATCTCGTTTAAATATAGGTGGTTTCGAT
CGACAAACATGGTATTTTGCCAAAGATATTCAAGCATGGGGAACGGTAAAAAGTGCGGTCAAAATTTCGCAGGATTTTTC
GTGGCGAGAACAACGTTTAGCACATAGTTTGGTACAAACCCAAGGATTAACCCAACAAGGACTTTTACTCGCCCTTGGCT
TTGGTGAGCGAGCATGGTTACATCCAGAGATTTGGCAACGCTATCAACAAACCAACACGGCTCATTTAATTGCGATTTCT
GGACTGCATATCGGCTTGGCGATGGCACTCGGTTTTTGGTTAGTTCGAGTGATACAGTATTTTTTACCTACCCGAAAAAT
AACCCCTATTCTGCCTTTATGTGGCGGGGTAATACTCGCTTTATTATATGCACAATTAGCGGGTTTTGCGATTCCTACCT
TGCGAGCCATTCTAGCGATATTAATAGTGATATTATTGCGTTTTTATCGAGCCTATTGTACTGCATGGCAACTCTATGTT
CGGGTAGTGGCATTGTTGTTGCTATGCGATCCTTTAATGATTTTATCCACGAGTTTTTGGTTATCCATCGGGGCAGTAGC
TTGCTTAATTTTATGGTATCAGCTTTTCCCATTGCATTTAATGAGGTGGCGTGGTTTACCTCTGTCGCCAAAAGTGCGGT
GGATTTTTGCATTATTTCACTTACAGTTAGGTTTATTTTGTTTATTTACTCCGATTCAACTGGCTTTTTTCCATGGGTTT
TCGTTACAAGGCTTTGTCGCAAATTTATTAATAGTACCTCTATATAGCTTTTTACTGGTGCCTATTGTGTTATTGGCGGT
ATTTAGTCATGGCGGTTTTTATAGTTGGCAAATAGCAAATTTTTTAGCCGATAAAATTACCGATTTACTTTCGCTTTTTC
AACATAGTTGGCTGAATTTGTCTTATCTGCAAAGTTTGTATTTAAATATTTTATTAGCGTTTATATTATGGGTAGCCTTA
TATAAAACTTATGGTCCAACTCAGAACGTTGCCAATTATCAGCAAAGACCGCCTTACTTTTCCTTAAAATCAGATCGTAG
TTTATCTCCCATTCTTTATAATCGTATGCAACAAGGCTTGATCCTGTTTATTTTAGCTTGTACTACATTACTTTGTGGAC
ATTATTTTTATCGTTCAGATTGGCAAGTAGAAACCCTTGATGTGGGACAAGGATTAGCCACATTAATTGTGAAAGATCAA
CATGGAATTTTGTACGATACTGGAGCAAGTTGGCAAGGTGGATCGATGGTAGAACTTGAAATTATACCTTATTTGCAACG
ACAAGGAATTAAGTTAGATTATGTCATTGTCAGCCATGATGACAATGATCATGCTGGCGGGGCAAGTGCGATAATAAAGA
TGTTTCCAGATGCTGTGTTTATCAGTCCATCCTATAAAAACTATGGCGAAAACTACCGCGGTTTTTGTAAGAAAGGTGAA
CAGTGGGAATGGCAAGGGATAAAGATAAGTGCATTATCCCCAGATACGCTTGTACAACGAGCAGAGAACCGAGATTCTTG
TATATTATTAATGCGACAAGCTACGCATACTGTCTTACTAACGGGAGATGCAGATATTGCTATAGAACAACGGATTCTAT
CAACATTATCTAAAGTAGAGGTGTTACAAGTTGGGCATCATGGGAGTAAAACATCCACAGGAATAAATTTTATAAATAAA
ATTAAACCTGATATAGCGTTGATTTCTAGTGGTCGTTGGAATCCTTGGCATTTTCCTAATCAAGGCGTGATAGAACGTTT
ACGTCAAGCTAAAAGCGCGGTGTATAATACCGCAGTTGCGGGACAAATTTCTGTGCGATTTTATGCGGATAACACCGCGA
TAGTGACTGCTAGAAATGAGTTGAGTCCTTGGTATCAACAGATTATTGATGTTCAAGCGCGTGATTAA

Domains

Predicted by InterproScan.

Competence protein (Competence)

(212-480)

Domain of unknown function (DUF4131) (DUF4131)

(37-179)

Metallo-beta-lactamase superfamily (Lactamase_B)

(547-730)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4R1KXZ4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rec2 Haemophilus influenzae Rd KW20

52.381

100

0.526

Multiple sequence alignment