Detailed information NTG1057947

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: ACFJI0_RS17270
• Genome accession: NZ_CP170552
• Coordinates: 3423402..3424430 (+)
• Length: 342 a.a.
• NCBI ID: WP_382321390.1
• Uniprot ID: -
• Organism: Hydrogenophaga sp. UC242_53
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3418402..3429430

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACFJI0_RS17245 (ACFJI0_17245)	-	3418954..3419256 (-)	303	WP_291113989.1	YfhL family 4Fe-4S dicluster ferredoxin	-
ACFJI0_RS17250 (ACFJI0_17250)	coaD	3419349..3419867 (-)	519	WP_382321386.1	pantetheine-phosphate adenylyltransferase	-
ACFJI0_RS17255 (ACFJI0_17255)	rsmD	3419904..3420518 (-)	615	WP_382321388.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
ACFJI0_RS17260 (ACFJI0_17260)	-	3420539..3421877 (-)	1339	Protein_3417	M16 family metallopeptidase	-
ACFJI0_RS17265 (ACFJI0_17265)	-	3421895..3423312 (-)	1418	Protein_3418	M16 family metallopeptidase	-
ACFJI0_RS17270 (ACFJI0_17270)	pilA	3423402..3424430 (+)	1029	WP_382321390.1	signal recognition particle-docking protein FtsY	Machinery gene
ACFJI0_RS17275 (ACFJI0_17275)	-	3424490..3425329 (+)	840	WP_382321392.1	undecaprenyl-diphosphate phosphatase	-
ACFJI0_RS17280 (ACFJI0_17280)	-	3425326..3425646 (+)	321	WP_382321394.1	hypothetical protein	-
ACFJI0_RS17285 (ACFJI0_17285)	-	3425654..3426793 (+)	1140	WP_382321396.1	FAD-dependent oxidoreductase	-
ACFJI0_RS17290 (ACFJI0_17290)	-	3426904..3427692 (+)	789	WP_382321398.1	DUF4399 domain-containing protein	-
ACFJI0_RS17295 (ACFJI0_17295)	-	3427697..3428404 (-)	708	WP_382321400.1	haloacid dehalogenase type II	-
ACFJI0_RS17300 (ACFJI0_17300)	-	3428410..3428793 (-)	384	WP_382321402.1	RidA family protein	-

Sequence

Protein

• Length: 342 a.a.
• Molecular weight: 35716.27 Da
• Isoelectric Point: 8.0806

>NTDB_id=1057947 ACFJI0_RS17270 WP_382321390.1 3423402..3424430(+) (pilA) [Hydrogenophaga sp. UC242_53]
MFSFFRKKAPTPPTPALPEAPAPSPAAPAPAAAAPTPAAPAAAPRQGWLDKLKAGLRKTGSGIATVFTGTQIDDALYEEL
ESALLMADTGVKATTHLLSDLKRRVKESKTTDPAAVKGLLADAIADLLAPLQKPLVIGEHKPTVIMVAGVNGAGKTTSIG
KLTRHLADSGASVLLAAADTFRAAAREQLAVWADRNTVEIITQQGGDPAAVSFDAVTAGKARGRDVVLVDTAGRLPTQLH
LMEELRKIKRVVQKADAGAPHEVLLVIDGNTGQNALMQVKAFDEALQLTGLVITKLDGTAKGGVLCAIAREKPVPVYFIG
VGEKLEDLETFDAREFAQALLA

Nucleotide

• Length: 1029 bp

>NTDB_id=1057947 ACFJI0_RS17270 WP_382321390.1 3423402..3424430(+) (pilA) [Hydrogenophaga sp. UC242_53]
ATGTTCTCGTTCTTTCGCAAAAAAGCCCCCACCCCGCCCACGCCCGCCCTGCCAGAGGCCCCCGCGCCCTCGCCTGCGGC
GCCCGCGCCAGCCGCTGCGGCACCCACGCCGGCTGCGCCCGCGGCCGCGCCGCGCCAGGGCTGGCTGGACAAACTCAAGG
CCGGCCTGCGCAAGACCGGCTCGGGCATCGCCACGGTGTTCACCGGCACCCAGATCGACGATGCCCTTTACGAAGAACTG
GAATCGGCCCTGCTGATGGCCGACACCGGCGTGAAGGCCACCACCCACCTGCTCAGCGACCTGAAGCGCCGCGTGAAGGA
AAGCAAGACCACCGACCCGGCCGCCGTCAAGGGTCTGCTGGCGGATGCCATCGCCGACCTGCTCGCCCCGCTGCAGAAGC
CGCTGGTGATCGGCGAGCACAAACCCACCGTGATCATGGTCGCGGGCGTCAACGGCGCGGGCAAGACCACCTCCATCGGC
AAGCTCACGCGCCACCTGGCCGACAGCGGCGCCTCGGTGCTGCTCGCGGCGGCCGACACCTTCCGCGCCGCCGCGCGCGA
GCAGCTGGCTGTCTGGGCCGACCGCAACACGGTGGAAATCATCACCCAGCAAGGCGGCGACCCCGCCGCCGTGAGCTTCG
ACGCCGTGACCGCCGGCAAGGCGCGCGGGCGCGACGTGGTGCTGGTGGACACCGCCGGGCGCCTGCCCACGCAGCTGCAC
CTGATGGAAGAGCTGCGCAAGATCAAGCGCGTGGTGCAGAAGGCCGATGCCGGCGCGCCGCATGAAGTGCTGCTGGTGAT
CGACGGCAACACCGGCCAGAACGCGCTCATGCAGGTGAAGGCCTTCGACGAGGCGCTGCAGCTCACCGGCCTGGTCATCA
CCAAGCTCGACGGCACCGCCAAGGGCGGCGTGCTCTGCGCGATCGCGCGCGAGAAGCCGGTGCCGGTCTACTTCATCGGG
GTCGGCGAGAAGCTCGAAGACCTCGAAACCTTCGACGCGCGCGAATTCGCGCAGGCCCTGCTGGCCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (61-123)

• SRP54-type protein, GTPase domain (SRP54) (142-341)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	59.667	87.719	0.523