Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ACFJI2_RS22475 Genome accession   NZ_CP170549
Coordinates   5075428..5075829 (-) Length   133 a.a.
NCBI ID   WP_057153667.1    Uniprot ID   A0A0Q6WP37
Organism   Pseudoduganella sp. UC29_71     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5070428..5080829
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFJI2_RS22460 (ACFJI2_22460) - 5072041..5074449 (-) 2409 WP_377701978.1 methyl-accepting chemotaxis protein -
  ACFJI2_RS22465 (ACFJI2_22465) - 5074476..5075030 (-) 555 WP_377701979.1 chemotaxis protein CheW -
  ACFJI2_RS22470 (ACFJI2_22470) - 5075034..5075402 (-) 369 WP_056393017.1 response regulator transcription factor -
  ACFJI2_RS22475 (ACFJI2_22475) pilG 5075428..5075829 (-) 402 WP_057153667.1 PleD family two-component system response regulator Regulator
  ACFJI2_RS22480 (ACFJI2_22480) - 5075863..5076015 (-) 153 WP_057153170.1 rubredoxin -
  ACFJI2_RS22485 (ACFJI2_22485) - 5076111..5076929 (+) 819 WP_377701980.1 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase -
  ACFJI2_RS22490 (ACFJI2_22490) hemL 5076945..5078231 (+) 1287 WP_377701981.1 glutamate-1-semialdehyde 2,1-aminomutase -
  ACFJI2_RS22495 (ACFJI2_22495) - 5078588..5079085 (+) 498 WP_377701982.1 hypothetical protein -
  ACFJI2_RS22500 (ACFJI2_22500) corA 5079095..5080060 (-) 966 WP_056393003.1 magnesium/cobalt transporter CorA -
  ACFJI2_RS22505 (ACFJI2_22505) - 5080149..5080565 (-) 417 WP_377701983.1 DUF4124 domain-containing protein -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14300.58 Da        Isoelectric Point: 7.9055

>NTDB_id=1057918 ACFJI2_RS22475 WP_057153667.1 5075428..5075829(-) (pilG) [Pseudoduganella sp. UC29_71]
MTTTPQATGLKIMVIDDSSTIRRSAEIFLSQAGYQVVLAEDGFEALAKINDHHPALIFCDILMPRLDGYQTCALIKKSAK
FHATPVLMLSSKDGLFDRARGTMVGSAAYLTKPFTKDSLLAAVREHTAGAAGV

Nucleotide


Download         Length: 402 bp        

>NTDB_id=1057918 ACFJI2_RS22475 WP_057153667.1 5075428..5075829(-) (pilG) [Pseudoduganella sp. UC29_71]
ATGACGACTACGCCGCAAGCGACAGGTTTGAAGATCATGGTGATCGACGATAGCAGCACCATTCGCCGGTCGGCCGAGAT
ATTCCTGAGCCAGGCGGGTTACCAGGTGGTGCTGGCCGAAGACGGCTTCGAGGCCCTGGCCAAGATCAACGACCACCACC
CCGCGCTCATTTTCTGCGACATCCTGATGCCGCGCCTGGATGGCTACCAGACCTGCGCCCTGATCAAAAAGAGCGCCAAA
TTCCACGCCACGCCGGTCCTGATGCTGTCCTCCAAGGACGGCCTGTTCGACCGCGCGCGCGGCACCATGGTCGGCTCGGC
CGCCTACCTGACCAAACCATTTACCAAAGACAGCCTGCTGGCGGCCGTGCGCGAGCATACCGCAGGCGCGGCGGGGGTCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(12-124)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0Q6WP37

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

62.5

90.226

0.564

Multiple sequence alignment