Detailed information NTG1057740

Bioinformatically predicted

Overview

• Name: abrB
• Type: Regulator
• Locus tag: VWC80_RS12790
• Genome accession: NZ_CP170495
• Coordinates: 2423975..2424253 (+)
• Length: 92 a.a.
• NCBI ID: WP_000842216.1
• Uniprot ID: A0A9W5QHH7
• Organism: Bacillus thuringiensis strain IPPBIOTSUC-1012
• Function: repression of comK; repression of rok (predicted from homology) Competence regulation

Genomic Context

Location: 2418975..2429253

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VWC80_RS12770 (VWC80_12755)	-	2420651..2421460 (+)	810	WP_000678509.1	papain-like cysteine protease family protein	-
VWC80_RS12775 (VWC80_12760)	-	2421486..2422088 (+)	603	WP_000517260.1	hypothetical protein	-
VWC80_RS12780 (VWC80_12765)	-	2422328..2422579 (-)	252	WP_000827560.1	response regulator transcription factor	-
VWC80_RS12785 (VWC80_12770)	-	2422956..2423834 (+)	879	WP_000397984.1	helix-turn-helix domain-containing protein	-
VWC80_RS12790 (VWC80_12775)	abrB	2423975..2424253 (+)	279	WP_000842216.1	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	Regulator
VWC80_RS12795 (VWC80_12780)	-	2424775..2426025 (+)	1251	WP_001032367.1	hypothetical protein	-
VWC80_RS12800 (VWC80_12785)	-	2426093..2426851 (+)	759	WP_087875368.1	TSUP family transporter	-
VWC80_RS12805 (VWC80_12790)	-	2427105..2427764 (+)	660	WP_087875369.1	CatB-related O-acetyltransferase	-

Sequence

Protein

• Length: 92 a.a.
• Molecular weight: 10378.28 Da
• Isoelectric Point: 10.0092

>NTDB_id=1057740 VWC80_RS12790 WP_000842216.1 2423975..2424253(+) (abrB) [Bacillus thuringiensis strain IPPBIOTSUC-1012]
MKSRGITRKADSMGRIVIPMEIRRSLGIVEKDSLEMFIEEDQIILRKYQSPRACALTGDISDSNISLANGKIIVSPNGME
LLIKKLQQYLLK

Nucleotide

• Length: 279 bp

>NTDB_id=1057740 VWC80_RS12790 WP_000842216.1 2423975..2424253(+) (abrB) [Bacillus thuringiensis strain IPPBIOTSUC-1012]
ATGAAATCAAGAGGAATTACTCGTAAAGCAGATAGTATGGGGCGTATTGTTATTCCAATGGAAATAAGACGGAGTTTAGG
AATTGTAGAAAAAGATTCTCTTGAAATGTTTATAGAAGAGGATCAGATTATTTTACGAAAATATCAATCTCCAAGAGCTT
GTGCACTTACAGGAGATATTTCAGACAGCAATATTTCGTTAGCGAATGGGAAGATTATCGTAAGTCCAAACGGGATGGAA
CTGTTAATAAAGAAGTTACAGCAATATCTTTTAAAGTAA

Domains

Predicted by InterproScan.

• AbrB C-terminal domain (AbrB_C) (53-89)

• Antidote-toxin recognition MazE, bacterial antitoxin (MazE_antitoxin) (9-52)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
abrB	Bacillus subtilis subsp. subtilis str. 168	50	97.826	0.489