Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   VWC80_RS06675 Genome accession   NZ_CP170495
Coordinates   1261447..1261623 (+) Length   58 a.a.
NCBI ID   WP_001986215.1    Uniprot ID   A0A9W5QJV7
Organism   Bacillus thuringiensis strain IPPBIOTSUC-1012     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1256447..1266623
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VWC80_RS06655 (VWC80_06645) clpC 1256778..1259378 (+) 2601 WP_000365405.1 ATP-dependent chaperone ClpB Regulator
  VWC80_RS06660 (VWC80_06650) - 1259417..1259599 (-) 183 WP_001211116.1 YjzD family protein -
  VWC80_RS06665 (VWC80_06655) - 1259756..1260490 (+) 735 WP_000028691.1 hydrolase -
  VWC80_RS06670 (VWC80_06660) - 1260520..1261392 (+) 873 WP_001986101.1 NAD(P)-dependent oxidoreductase -
  VWC80_RS06675 (VWC80_06665) comZ 1261447..1261623 (+) 177 WP_001986215.1 ComZ family protein Regulator
  VWC80_RS06680 (VWC80_06670) fabH 1261844..1262776 (+) 933 WP_001100532.1 beta-ketoacyl-ACP synthase III -
  VWC80_RS06685 (VWC80_06675) fabF 1262807..1264045 (+) 1239 WP_087875068.1 beta-ketoacyl-ACP synthase II -
  VWC80_RS06690 (VWC80_06680) - 1264152..1264940 (+) 789 WP_000513275.1 DUF2268 domain-containing protein -
  VWC80_RS06695 (VWC80_06685) - 1265085..1265831 (+) 747 WP_000966128.1 YjbA family protein -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6576.74 Da        Isoelectric Point: 4.4797

>NTDB_id=1057730 VWC80_RS06675 WP_001986215.1 1261447..1261623(+) (comZ) [Bacillus thuringiensis strain IPPBIOTSUC-1012]
MNEKSMQFLQIAMKHLPEAKAILDDNGIALDMEKAQPVLELLMKVMNEAYELGKADKE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=1057730 VWC80_RS06675 WP_001986215.1 1261447..1261623(+) (comZ) [Bacillus thuringiensis strain IPPBIOTSUC-1012]
ATGAACGAAAAAAGCATGCAGTTTTTACAAATTGCAATGAAGCATTTACCGGAAGCAAAGGCAATTTTAGATGATAATGG
AATTGCACTTGATATGGAGAAGGCACAGCCGGTGTTAGAGTTGTTAATGAAAGTTATGAACGAAGCTTACGAGCTCGGGA
AAGCAGATAAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586

Multiple sequence alignment