Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   ACFDSG_RS27700 Genome accession   NZ_CP170487
Coordinates   5261572..5261766 (-) Length   64 a.a.
NCBI ID   WP_013081746.1    Uniprot ID   A0A8D3X5H5
Organism   Priestia megaterium strain AJ5     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 5256572..5266766
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFDSG_RS27675 - 5256739..5257761 (-) 1023 WP_377519965.1 ABC transporter ATP-binding protein -
  ACFDSG_RS27680 - 5257988..5258761 (-) 774 WP_328175366.1 DUF2268 domain-containing protein -
  ACFDSG_RS27685 fabF 5258867..5260108 (-) 1242 WP_028412374.1 beta-ketoacyl-ACP synthase II -
  ACFDSG_RS27690 - 5260148..5261086 (-) 939 WP_016763039.1 beta-ketoacyl-ACP synthase III -
  ACFDSG_RS27695 - 5261343..5261543 (+) 201 WP_016763038.1 hypothetical protein -
  ACFDSG_RS27700 comZ 5261572..5261766 (-) 195 WP_013081746.1 ComZ family protein Regulator
  ACFDSG_RS27705 - 5261844..5262728 (-) 885 WP_016763037.1 NAD(P)-dependent oxidoreductase -
  ACFDSG_RS27710 - 5262910..5263650 (-) 741 WP_013081744.1 hypothetical protein -
  ACFDSG_RS27715 - 5263861..5264049 (+) 189 WP_013055400.1 YjzD family protein -
  ACFDSG_RS27720 - 5264252..5265136 (+) 885 WP_034654398.1 NAD(P)-dependent oxidoreductase -
  ACFDSG_RS27725 galT 5265179..5266702 (-) 1524 WP_377519966.1 UDP-glucose--hexose-1-phosphate uridylyltransferase -

Sequence

Protein


Download         Length: 64 a.a.        Molecular weight: 7357.39 Da        Isoelectric Point: 3.9484

>NTDB_id=1057659 ACFDSG_RS27700 WP_013081746.1 5261572..5261766(-) (comZ) [Priestia megaterium strain AJ5]
MEEQNMQFMQIAMKYLPEAKQILDETGVELSMEHVQPVLTLLTKVMNDAYELGKQDALAENENN

Nucleotide


Download         Length: 195 bp        

>NTDB_id=1057659 ACFDSG_RS27700 WP_013081746.1 5261572..5261766(-) (comZ) [Priestia megaterium strain AJ5]
ATGGAAGAGCAAAATATGCAATTCATGCAAATTGCAATGAAGTACTTGCCAGAAGCAAAACAGATCTTAGATGAAACAGG
TGTTGAGTTATCAATGGAACACGTACAGCCGGTATTGACATTACTAACAAAAGTAATGAACGATGCCTATGAGCTTGGCA
AGCAAGATGCATTAGCTGAAAATGAAAACAACTAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

60

93.75

0.563

Multiple sequence alignment