Detailed information
Bioinformatically predicted
Overview
| Name | nucA/comI | Type | Machinery gene |
| Locus tag | ACFDSG_RS00865 | Genome accession | NZ_CP170487 |
| Coordinates | 154281..154652 (+) | Length | 123 a.a. |
| NCBI ID | WP_377521655.1 | Uniprot ID | - |
| Organism | Priestia megaterium strain AJ5 | ||
| Function | cleavage of dsDNA into ssDNA (predicted from homology) DNA processing |
||
Genomic Context
Location: 149281..159652
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACFDSG_RS00840 | - | 149680..150810 (+) | 1131 | WP_377520394.1 | bifunctional lytic transglycosylase/C40 family peptidase | - |
| ACFDSG_RS00845 | - | 150835..151332 (+) | 498 | WP_377520395.1 | hypothetical protein | - |
| ACFDSG_RS00850 | - | 151490..151759 (+) | 270 | WP_377521654.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| ACFDSG_RS00855 | - | 151807..152238 (+) | 432 | WP_377520396.1 | hypothetical protein | - |
| ACFDSG_RS00860 | - | 152295..154097 (+) | 1803 | WP_377520397.1 | hypothetical protein | - |
| ACFDSG_RS00865 | nucA/comI | 154281..154652 (+) | 372 | WP_377521655.1 | DNA-entry nuclease | Machinery gene |
| ACFDSG_RS00870 | - | 154720..154968 (+) | 249 | WP_377520398.1 | hypothetical protein | - |
| ACFDSG_RS00875 | - | 155010..155891 (+) | 882 | WP_377520400.1 | hypothetical protein | - |
| ACFDSG_RS00880 | - | 156175..156321 (+) | 147 | WP_377520401.1 | sporulation histidine kinase inhibitor Sda | - |
| ACFDSG_RS00885 | - | 156329..156457 (-) | 129 | WP_255323625.1 | hypothetical protein | - |
| ACFDSG_RS00890 | - | 156693..157385 (+) | 693 | WP_377520402.1 | hypothetical protein | - |
| ACFDSG_RS00895 | - | 157571..157753 (-) | 183 | WP_377520403.1 | hypothetical protein | - |
| ACFDSG_RS00900 | - | 158207..158521 (+) | 315 | WP_377520404.1 | hypothetical protein | - |
| ACFDSG_RS00905 | - | 158835..159041 (+) | 207 | WP_377520405.1 | hypothetical protein | - |
| ACFDSG_RS00910 | - | 159168..159500 (+) | 333 | WP_377520406.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 123 a.a. Molecular weight: 13518.91 Da Isoelectric Point: 4.5276
>NTDB_id=1057608 ACFDSG_RS00865 WP_377521655.1 154281..154652(+) (nucA/comI) [Priestia megaterium strain AJ5]
MDLKGLFSSPQASSTSYDKVIYFPADRYPKTAAHIEHAIEEGKSAICTIDREGAEENRSQSLKGVPTKDGYDRDEFPMAF
CDEGGTGADIDYVKPTDNRGAGSWISHQVDEFPDGTKVLIQVK
MDLKGLFSSPQASSTSYDKVIYFPADRYPKTAAHIEHAIEEGKSAICTIDREGAEENRSQSLKGVPTKDGYDRDEFPMAF
CDEGGTGADIDYVKPTDNRGAGSWISHQVDEFPDGTKVLIQVK
Nucleotide
Download Length: 372 bp
>NTDB_id=1057608 ACFDSG_RS00865 WP_377521655.1 154281..154652(+) (nucA/comI) [Priestia megaterium strain AJ5]
ATTGACTTAAAAGGGTTGTTCTCTTCACCACAAGCAAGTAGTACATCGTATGATAAAGTGATCTATTTTCCGGCTGATAG
ATATCCCAAAACCGCAGCACATATTGAACATGCGATTGAGGAAGGCAAGTCAGCCATTTGTACAATTGATCGTGAGGGAG
CAGAAGAGAATAGAAGCCAATCTTTAAAGGGGGTTCCTACTAAGGATGGATATGACAGAGATGAATTTCCAATGGCATTT
TGTGATGAAGGAGGAACAGGCGCAGACATTGATTATGTTAAACCTACTGATAATCGAGGCGCAGGTTCTTGGATATCTCA
TCAGGTTGATGAATTCCCTGATGGAACAAAAGTTTTAATTCAAGTGAAATAG
ATTGACTTAAAAGGGTTGTTCTCTTCACCACAAGCAAGTAGTACATCGTATGATAAAGTGATCTATTTTCCGGCTGATAG
ATATCCCAAAACCGCAGCACATATTGAACATGCGATTGAGGAAGGCAAGTCAGCCATTTGTACAATTGATCGTGAGGGAG
CAGAAGAGAATAGAAGCCAATCTTTAAAGGGGGTTCCTACTAAGGATGGATATGACAGAGATGAATTTCCAATGGCATTT
TGTGATGAAGGAGGAACAGGCGCAGACATTGATTATGTTAAACCTACTGATAATCGAGGCGCAGGTTCTTGGATATCTCA
TCAGGTTGATGAATTCCCTGATGGAACAAAAGTTTTAATTCAAGTGAAATAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| nucA/comI | Bacillus subtilis subsp. subtilis str. 168 |
58.871 |
100 |
0.593 |