Detailed information NTG1057505

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: ACEQUB_RS01560
• Genome accession: NZ_CP170451
• Coordinates: 306526..307647 (-)
• Length: 373 a.a.
• NCBI ID: WP_197331682.1
• Uniprot ID: G3A476
• Organism: Ralstonia syzygii strain Br19
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 301526..312647

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACEQUB_RS01535 (ACEQUB_00292)	-	302223..303485 (-)	1263	WP_075465415.1	CmpA/NrtA family ABC transporter substrate-binding protein	-
ACEQUB_RS01540 (ACEQUB_00293)	-	303762..304388 (-)	627	WP_197329685.1	ANTAR domain-containing response regulator	-
ACEQUB_RS01545 (ACEQUB_00294)	-	304539..305240 (+)	702	WP_197331684.1	fumarylacetoacetate hydrolase family protein	-
ACEQUB_RS01550 (ACEQUB_00295)	maiA	305244..305894 (+)	651	WP_197331683.1	maleylacetoacetate isomerase	-
ACEQUB_RS01555 (ACEQUB_00296)	-	305891..306529 (+)	639	WP_078222381.1	LysE/ArgO family amino acid transporter	-
ACEQUB_RS01560 (ACEQUB_00297)	pilA	306526..307647 (-)	1122	WP_197331682.1	signal recognition particle-docking protein FtsY	Machinery gene
ACEQUB_RS01565 (ACEQUB_00298)	-	307708..309201 (+)	1494	WP_197331681.1	pitrilysin family protein	-
ACEQUB_RS01570 (ACEQUB_00299)	-	309201..310544 (+)	1344	WP_197331680.1	pitrilysin family protein	-
ACEQUB_RS01575 (ACEQUB_00300)	rsmD	310584..311230 (+)	647	Protein_314	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
ACEQUB_RS01580 (ACEQUB_00301)	coaD	311426..311932 (+)	507	WP_003262550.1	pantetheine-phosphate adenylyltransferase	-
ACEQUB_RS01585 (ACEQUB_00302)	-	311983..312231 (+)	249	WP_078222383.1	YfhL family 4Fe-4S dicluster ferredoxin	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 39650.85 Da
• Isoelectric Point: 6.1635

>NTDB_id=1057505 ACEQUB_RS01560 WP_197331682.1 306526..307647(-) (pilA) [Ralstonia syzygii strain Br19]
MFSFWKKRKAEPQPAAEPVPPAAAPEAVQAPAPVASPAPAPAPVAVPDTPATPAALDMQADDIETVPTPPVVEQARKGWM
SRLRSGLSKTSKGLTTLFVGVKVDEALFEELETALLMADAGVDATEYLLGELRRRVKAQRIETAEGVKTALRDLLIELLH
PLEKTMVLGREQPTVIMIAGVNGAGKTTSIGKLCKHFQTYGQSVLLAAGDTFRAAAREQLVIWGQRNNVTVVAQESGDPA
AVIFDAVNAARARGIDIVMADTAGRLPTQLHLMEELKKVRRVIGKAMATAPHETLLVIDANTGQNALAQVKAFDDTLGLT
GLIITKLDGTAKGGILAAIARQRPVPVYFIGVGEQVEDLQPFSAREFADALLG

Nucleotide

• Length: 1122 bp

>NTDB_id=1057505 ACEQUB_RS01560 WP_197331682.1 306526..307647(-) (pilA) [Ralstonia syzygii strain Br19]
ATGTTTAGTTTCTGGAAGAAGCGCAAGGCAGAGCCCCAGCCGGCTGCCGAACCGGTGCCGCCCGCCGCCGCACCTGAAGC
GGTACAGGCCCCGGCCCCGGTTGCCTCCCCCGCACCTGCACCCGCCCCGGTTGCCGTGCCGGATACACCGGCCACGCCGG
CTGCGCTGGACATGCAGGCCGACGATATCGAGACCGTGCCGACGCCGCCCGTGGTGGAGCAGGCGCGCAAGGGCTGGATG
TCGCGCCTGCGCTCGGGCCTGTCGAAGACCAGCAAGGGGCTGACCACGCTGTTCGTCGGCGTGAAGGTGGACGAGGCGCT
GTTCGAGGAGCTGGAAACCGCGCTGCTGATGGCCGATGCCGGCGTCGATGCCACCGAATACCTGCTGGGCGAACTGCGCC
GCCGTGTGAAAGCCCAGCGCATCGAGACCGCCGAGGGCGTGAAGACCGCGCTGCGCGACCTGCTCATCGAGCTGCTGCAT
CCGCTGGAAAAGACCATGGTGCTCGGCCGCGAGCAGCCGACGGTGATCATGATCGCGGGCGTCAACGGCGCCGGCAAGAC
CACCAGCATCGGCAAGCTGTGCAAGCACTTCCAGACCTACGGGCAATCCGTGCTGCTGGCAGCGGGCGACACGTTCCGTG
CCGCCGCGCGCGAGCAGTTGGTGATCTGGGGCCAGCGCAACAACGTGACCGTGGTGGCGCAGGAATCGGGCGACCCGGCC
GCCGTGATCTTCGACGCGGTGAACGCGGCGCGCGCCCGCGGCATCGATATCGTCATGGCCGACACCGCCGGCCGCCTGCC
GACCCAGCTGCACCTGATGGAAGAACTGAAGAAGGTGCGCCGCGTGATCGGCAAGGCGATGGCGACGGCGCCGCACGAGA
CGTTGCTGGTGATCGACGCCAACACCGGCCAGAATGCGCTGGCGCAGGTGAAAGCCTTCGACGATACGCTCGGCCTGACC
GGCCTGATCATCACCAAGCTGGACGGCACCGCCAAGGGCGGCATCCTGGCCGCCATCGCGCGGCAGCGGCCTGTACCGGT
GTATTTCATCGGCGTGGGCGAACAGGTGGAAGACCTGCAGCCGTTCTCCGCGCGCGAATTCGCCGACGCGCTGCTGGGCT
AG

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (173-373)

• SRP54-type protein, helical bundle domain (SRP54_N) (92-153)

3D structure

• AlphaFold DB: G3A476

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	51.442	100	0.574