Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   ACFIOS_RS09255 Genome accession   NZ_CP170436
Coordinates   1905267..1906310 (-) Length   347 a.a.
NCBI ID   WP_001017131.1    Uniprot ID   A0A0D1IMN4
Organism   Staphylococcus aureus strain t1510     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1900267..1911310
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFIOS_RS09225 - 1900689..1901936 (-) 1248 WP_000656302.1 aminopeptidase -
  ACFIOS_RS09230 - 1901948..1902148 (-) 201 WP_000180459.1 DUF1128 family protein -
  ACFIOS_RS09235 - 1902295..1902759 (+) 465 WP_000228668.1 low molecular weight protein-tyrosine-phosphatase -
  ACFIOS_RS09240 - 1902766..1903041 (+) 276 WP_000428172.1 YtxH domain-containing protein -
  ACFIOS_RS09245 - 1903319..1904535 (+) 1217 Protein_1780 YihY/virulence factor BrkB family protein -
  ACFIOS_RS09250 vraR 1904648..1905277 (-) 630 WP_000153535.1 two-component system response regulator VraR Regulator
  ACFIOS_RS09255 vraS 1905267..1906310 (-) 1044 WP_001017131.1 sensor histidine kinase Regulator
  ACFIOS_RS09260 liaF 1906307..1907008 (-) 702 WP_000149064.1 cell wall-active antibiotics response protein LiaF -
  ACFIOS_RS09265 - 1907023..1907409 (-) 387 WP_001110184.1 hypothetical protein -
  ACFIOS_RS09270 map 1907626..1908384 (-) 759 WP_000636137.1 type I methionyl aminopeptidase -
  ACFIOS_RS09275 - 1908915..1909901 (+) 987 WP_000999713.1 FUSC family protein -
  ACFIOS_RS09280 - 1910079..1910492 (-) 414 WP_001622129.1 hypothetical protein -
  ACFIOS_RS09285 - 1910521..1910630 (-) 110 Protein_1788 hypothetical protein -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40044.52 Da        Isoelectric Point: 6.0577

>NTDB_id=1057373 ACFIOS_RS09255 WP_001017131.1 1905267..1906310(-) (vraS) [Staphylococcus aureus strain t1510]
MNHYIRTIGSMLILVYSMLAAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLIIILLCIIVGSVLAYKINQQNDWIKT
QIERSMEGETVGINDQNIEIYSETLDLYHTLVPLNQELHKLRLKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEPPLDQQIPILEKMVQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVVHEI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNKDDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEDSYDD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=1057373 ACFIOS_RS09255 WP_001017131.1 1905267..1906310(-) (vraS) [Staphylococcus aureus strain t1510]
ATGAACCACTACATTAGAACAATTGGTTCAATGCTCATCTTAGTATATAGCATGCTAGCTGCATTTCTGTTCATCGATAA
AGTTTTTGTAAATATCATCTATTTTCAAGGTATGTTTTATACACAAATATTCGGAATACCAGTCTTTTTATTTTTAAATC
TCATCATCATATTATTGTGTATTATTGTTGGTTCGGTACTCGCTTACAAAATCAATCAGCAAAATGATTGGATTAAGACG
CAAATTGAGCGTTCAATGGAAGGCGAAACAGTTGGCATTAATGATCAAAATATAGAAATATATAGTGAAACGTTAGATTT
ATACCATACACTCGTACCTTTAAATCAAGAATTGCATAAGTTGCGACTTAAAACTCAAAACTTAACCAATGAAAATTATA
ATATTAATGATGTGAAAGTTAAAAAGATTATTGAAGATGAACGTCAAAGACTAGCACGAGAACTTCACGATTCTGTTAGT
CAGCAACTTTTTGCGGCAAGTATGATGCTATCTGCTATCAAAGAAACGAAGTTAGAACCACCATTAGACCAACAAATTCC
GATTTTAGAGAAAATGGTTCAAGATTCGCAGTTAGAAATGCGTGCTTTGCTGTTACATTTAAGACCGCTTGGTTTAAAAG
ACAAATCTTTAGGTGAGGGTATTAAAGATTTAGTTATTGATTTACAAAAAAAAGTGCCAATGAAAGTTGTGCATGAAATA
CAAGATTTTAAAGTACCTAAAGGTATTGAAGATCATTTGTTCAGAATTACACAGGAAGCAATTTCGAATACATTGCGTCA
TTCAAACGGTACAAAAGTGACAGTCGAATTGTTTAATAAAGACGATTATTTATTGTTGAGAATTCAAGACAATGGTAAAG
GTTTTAATGTTGATGAAAAATTAGAACAAAGTTATGGACTTAAAAATATGCGTGAAAGAGCTTTGGAAATTGGTGCAACG
TTCCATATTGTATCATTGCCAGATTCAGGTACACGTATCGAGGTGAAAGCACCTTTAAATAAGGAGGATTCGTATGACGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0D1IMN4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

100

100

1


Multiple sequence alignment