Detailed information    

insolico Bioinformatically predicted

Overview

Name   agrA   Type   Regulator
Locus tag   ACFIOI_RS03650 Genome accession   NZ_CP170432
Coordinates   728559..729275 (-) Length   238 a.a.
NCBI ID   WP_000688492.1    Uniprot ID   A0A7U7IEW1
Organism   Staphylococcus aureus strain t1476     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 723559..734275
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFIOI_RS03630 - 724653..725603 (+) 951 WP_410531765.1 LacI family DNA-binding transcriptional regulator -
  ACFIOI_RS03635 - 725752..727236 (+) 1485 WP_000141414.1 sucrose-6-phosphate hydrolase -
  ACFIOI_RS03640 - 727233..728192 (+) 960 WP_001253312.1 carbohydrate kinase family protein -
  ACFIOI_RS03645 - 728380..728487 (-) 108 WP_001790167.1 hypothetical protein -
  ACFIOI_RS03650 agrA 728559..729275 (-) 717 WP_000688492.1 quorum-sensing response regulator AgrA Regulator
  ACFIOI_RS03655 agrC 729294..730586 (-) 1293 WP_001554031.1 quorum-sensing sensor histidine kinase AgrC -
  ACFIOI_RS03660 agrD 730611..730751 (-) 141 WP_001093929.1 cyclic lactone autoinducer peptide AgrD -
  ACFIOI_RS03665 agrB 730748..731317 (-) 570 WP_001105707.1 accessory gene regulator AgrB -
  ACFIOI_RS03670 hld 731607..731687 (+) 81 WP_000046022.1 delta-hemolysin -
  ACFIOI_RS03675 - 732284..733069 (-) 786 WP_000867960.1 carbon-nitrogen family hydrolase -
  ACFIOI_RS03680 - 733430..734056 (-) 627 WP_000522384.1 nitroreductase family protein -

Sequence

Protein


Download         Length: 238 a.a.        Molecular weight: 27905.90 Da        Isoelectric Point: 6.0927

>NTDB_id=1057260 ACFIOI_RS03650 WP_000688492.1 728559..729275(-) (agrA) [Staphylococcus aureus strain t1476]
MKIFICEDDPKQRENMVTIIKNYIMIEEKPMEIALATDNPYEVLEQAKNMNDIGCYFLDIQLSTDINGIKLGSEIRKHDP
VGNIIFVTSHSELTYLTFVYKVAAMDFIFKDDPAELRTRIIDCLETAHTRLQLLSKDNSVETIELKRGSNSVYVQYDDIM
FFESSTKSHRLIAHLDNRQIEFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKERIVYFKNKEHCYASVRNVKKI

Nucleotide


Download         Length: 717 bp        

>NTDB_id=1057260 ACFIOI_RS03650 WP_000688492.1 728559..729275(-) (agrA) [Staphylococcus aureus strain t1476]
ATGAAAATTTTCATTTGCGAAGACGATCCAAAACAAAGAGAAAACATGGTTACCATTATTAAAAATTATATAATGATAGA
AGAAAAGCCTATGGAAATTGCCCTCGCAACTGATAATCCTTATGAGGTGCTTGAGCAAGCTAAAAATATGAATGACATAG
GCTGTTACTTTTTAGATATTCAACTTTCAACTGATATTAATGGTATCAAATTAGGCAGTGAAATTCGTAAGCATGACCCA
GTTGGTAACATTATTTTCGTTACGAGTCACAGTGAACTTACCTATTTAACATTTGTCTACAAAGTTGCAGCGATGGATTT
TATTTTTAAAGATGATCCAGCTGAATTAAGAACTCGAATTATAGACTGTTTAGAAACTGCACATACACGCTTACAATTGT
TGTCTAAAGATAATAGCGTTGAAACGATTGAATTAAAACGTGGCAGTAATTCAGTGTATGTTCAATATGATGATATTATG
TTTTTTGAATCATCAACAAAATCTCACAGACTCATTGCCCATTTAGATAACCGTCAAATTGAATTTTATGGTAATTTAAA
AGAACTGAGTCAATTAGATGATCGTTTCTTTAGATGTCATAATAGCTTTGTCGTCAATCGCCATAATATTGAATCTATAG
ATTCGAAAGAGCGAATTGTCTATTTTAAAAATAAAGAACACTGCTATGCATCGGTGAGAAACGTTAAAAAAATATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-120)

LytTr DNA-binding domain (LytTR)

(151-237)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7IEW1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  agrA Staphylococcus aureus N315

100

100

1

Multiple sequence alignment