Detailed information    

insolico Bioinformatically predicted

Overview

Name   agrA   Type   Regulator
Locus tag   ACFIOC_RS10520 Genome accession   NZ_CP170419
Coordinates   2079825..2080541 (+) Length   238 a.a.
NCBI ID   WP_000688492.1    Uniprot ID   A0A7U7IEW1
Organism   Staphylococcus aureus strain t062     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2074825..2085541
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFIOC_RS10490 - 2075042..2075668 (+) 627 WP_000522384.1 nitroreductase family protein -
  ACFIOC_RS10495 - 2076029..2076814 (+) 786 WP_000867951.1 carbon-nitrogen family hydrolase -
  ACFIOC_RS10500 hld 2077414..2077494 (-) 81 WP_000046022.1 delta-hemolysin -
  ACFIOC_RS10505 - 2077784..2078347 (+) 564 WP_001105696.1 accessory gene regulator AgrB -
  ACFIOC_RS10510 agrD 2078350..2078493 (+) 144 WP_001094921.1 cyclic lactone autoinducer peptide AgrD -
  ACFIOC_RS10515 agrC 2078523..2079806 (+) 1284 WP_031786194.1 quorum-sensing sensor histidine kinase AgrC -
  ACFIOC_RS10520 agrA 2079825..2080541 (+) 717 WP_000688492.1 quorum-sensing response regulator AgrA Regulator
  ACFIOC_RS10525 - 2080613..2080722 (+) 110 Protein_2036 hypothetical protein -
  ACFIOC_RS10530 - 2080910..2081869 (-) 960 WP_001253312.1 carbohydrate kinase family protein -
  ACFIOC_RS10535 - 2081866..2083350 (-) 1485 WP_000141432.1 sucrose-6-phosphate hydrolase -
  ACFIOC_RS10540 - 2083499..2084449 (-) 951 WP_000790331.1 LacI family DNA-binding transcriptional regulator -

Sequence

Protein


Download         Length: 238 a.a.        Molecular weight: 27905.90 Da        Isoelectric Point: 6.0927

>NTDB_id=1057077 ACFIOC_RS10520 WP_000688492.1 2079825..2080541(+) (agrA) [Staphylococcus aureus strain t062]
MKIFICEDDPKQRENMVTIIKNYIMIEEKPMEIALATDNPYEVLEQAKNMNDIGCYFLDIQLSTDINGIKLGSEIRKHDP
VGNIIFVTSHSELTYLTFVYKVAAMDFIFKDDPAELRTRIIDCLETAHTRLQLLSKDNSVETIELKRGSNSVYVQYDDIM
FFESSTKSHRLIAHLDNRQIEFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKERIVYFKNKEHCYASVRNVKKI

Nucleotide


Download         Length: 717 bp        

>NTDB_id=1057077 ACFIOC_RS10520 WP_000688492.1 2079825..2080541(+) (agrA) [Staphylococcus aureus strain t062]
ATGAAAATTTTCATTTGCGAAGACGATCCAAAACAAAGAGAAAACATGGTTACCATTATTAAAAATTATATAATGATAGA
AGAAAAGCCTATGGAAATTGCCCTCGCAACTGATAATCCTTATGAGGTGCTTGAGCAAGCTAAAAATATGAATGACATAG
GCTGTTACTTTTTAGATATTCAACTTTCAACTGATATTAATGGTATCAAATTAGGCAGTGAAATTCGTAAGCATGACCCA
GTTGGTAACATTATTTTCGTTACGAGTCACAGTGAACTTACCTATTTAACATTTGTCTACAAAGTTGCAGCGATGGATTT
TATTTTTAAAGATGATCCAGCAGAATTAAGAACTCGAATTATAGATTGTTTAGAAACTGCACATACACGCTTACAATTGT
TGTCTAAAGATAATAGCGTTGAAACGATTGAATTAAAACGTGGCAGTAATTCAGTGTATGTTCAATATGATGATATTATG
TTTTTTGAATCATCAACAAAATCTCACAGACTCATTGCCCATTTAGATAACCGTCAAATTGAATTTTATGGTAATTTAAA
AGAACTGAGTCAATTAGATGATCGTTTCTTTAGATGTCATAATAGCTTTGTCGTCAATCGCCATAATATTGAATCTATAG
ATTCGAAAGAGCGAATTGTCTATTTTAAAAATAAAGAACACTGCTATGCATCGGTGAGAAACGTTAAAAAAATATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-120)

LytTr DNA-binding domain (LytTR)

(151-237)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7IEW1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  agrA Staphylococcus aureus N315

100

100

1

Multiple sequence alignment