Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   ACFIOL_RS04280 Genome accession   NZ_CP170416
Coordinates   845437..846480 (+) Length   347 a.a.
NCBI ID   WP_001017131.1    Uniprot ID   A0A0D1IMN4
Organism   Staphylococcus aureus strain t21644     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 840437..851480
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFIOL_RS04250 - 840803..840914 (+) 112 Protein_835 hypothetical protein -
  ACFIOL_RS04255 - 840943..841356 (+) 414 WP_001837236.1 hypothetical protein -
  ACFIOL_RS04260 - 841846..842832 (-) 987 WP_000999713.1 FUSC family protein -
  ACFIOL_RS04265 map 843363..844121 (+) 759 WP_000636142.1 type I methionyl aminopeptidase -
  ACFIOL_RS04270 - 844338..844724 (+) 387 WP_001110179.1 hypothetical protein -
  ACFIOL_RS04275 liaF 844739..845440 (+) 702 WP_000149064.1 cell wall-active antibiotics response protein LiaF -
  ACFIOL_RS04280 vraS 845437..846480 (+) 1044 WP_001017131.1 sensor histidine kinase Regulator
  ACFIOL_RS04285 vraR 846470..847099 (+) 630 WP_000153535.1 two-component system response regulator VraR Regulator
  ACFIOL_RS04290 - 847211..848422 (-) 1212 WP_000037091.1 YihY/virulence factor BrkB family protein -
  ACFIOL_RS04295 - 848700..848975 (-) 276 WP_000428172.1 YtxH domain-containing protein -
  ACFIOL_RS04300 - 848982..849446 (-) 465 WP_278198359.1 low molecular weight phosphotyrosine protein phosphatase -
  ACFIOL_RS04305 - 849593..849793 (+) 201 WP_000180460.1 DUF1128 family protein -
  ACFIOL_RS04310 - 849796..851052 (+) 1257 WP_001793428.1 aminopeptidase -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40044.52 Da        Isoelectric Point: 6.0577

>NTDB_id=1057005 ACFIOL_RS04280 WP_001017131.1 845437..846480(+) (vraS) [Staphylococcus aureus strain t21644]
MNHYIRTIGSMLILVYSMLAAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLIIILLCIIVGSVLAYKINQQNDWIKT
QIERSMEGETVGINDQNIEIYSETLDLYHTLVPLNQELHKLRLKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEPPLDQQIPILEKMVQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVVHEI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNKDDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEDSYDD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=1057005 ACFIOL_RS04280 WP_001017131.1 845437..846480(+) (vraS) [Staphylococcus aureus strain t21644]
ATGAACCACTACATTAGAACAATTGGTTCAATGCTCATCTTAGTATATAGCATGCTAGCTGCATTTCTATTCATCGATAA
AGTTTTTGTAAATATCATCTATTTTCAAGGTATGTTTTATACACAAATATTCGGAATACCAGTCTTTTTATTTTTAAATC
TCATCATCATATTATTGTGTATTATTGTTGGTTCGGTACTCGCATACAAAATCAATCAGCAAAATGATTGGATTAAGACG
CAAATTGAGCGTTCAATGGAAGGCGAAACAGTTGGCATTAATGATCAAAATATAGAAATATATAGTGAAACGTTAGATTT
ATACCATACACTCGTACCTTTAAATCAAGAATTGCATAAGTTGCGACTTAAAACTCAAAATTTAACCAATGAAAATTATA
ATATTAATGATGTGAAAGTTAAAAAGATTATTGAAGATGAACGTCAAAGACTAGCTCGAGAACTTCACGATTCTGTTAGT
CAGCAACTTTTTGCGGCAAGTATGATGCTTTCTGCTATCAAAGAAACGAAGTTAGAACCACCATTAGACCAACAAATTCC
GATTTTAGAGAAAATGGTTCAAGATTCGCAGTTAGAAATGCGTGCTTTGCTGTTACATTTAAGACCGCTTGGTTTAAAAG
ACAAATCTTTAGGTGAGGGTATTAAAGATTTAGTTATTGATTTACAAAAAAAAGTGCCGATGAAAGTTGTGCATGAAATA
CAAGATTTTAAAGTGCCTAAAGGTATTGAAGATCATTTGTTCAGAATTACACAGGAAGCAATTTCGAATACATTGCGTCA
TTCAAACGGTACAAAAGTGACAGTAGAATTGTTTAATAAAGACGATTATTTATTGTTGAGAATTCAAGACAATGGTAAAG
GTTTTAATGTTGATGAAAAATTAGAACAAAGTTATGGACTTAAAAATATGCGTGAAAGAGCTTTGGAAATTGGTGCAACG
TTCCATATTGTATCATTGCCAGATTCAGGTACACGTATCGAGGTGAAAGCACCTTTAAATAAGGAGGATTCGTATGACGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0D1IMN4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

100

100

1


Multiple sequence alignment