Detailed information    

insolico Bioinformatically predicted

Overview

Name   agrA   Type   Regulator
Locus tag   ACFIOL_RS03500 Genome accession   NZ_CP170416
Coordinates   711273..711989 (-) Length   238 a.a.
NCBI ID   WP_000688492.1    Uniprot ID   A0A7U7IEW1
Organism   Staphylococcus aureus strain t21644     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 706273..716989
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFIOL_RS03480 - 707365..708315 (+) 951 WP_000790329.1 LacI family DNA-binding transcriptional regulator -
  ACFIOL_RS03485 - 708464..709948 (+) 1485 WP_000141427.1 sucrose-6-phosphate hydrolase -
  ACFIOL_RS03490 - 709945..710904 (+) 960 WP_001253302.1 carbohydrate kinase family protein -
  ACFIOL_RS03495 - 711092..711201 (-) 110 Protein_684 hypothetical protein -
  ACFIOL_RS03500 agrA 711273..711989 (-) 717 WP_000688492.1 quorum-sensing response regulator AgrA Regulator
  ACFIOL_RS03505 agrC 712008..713300 (-) 1293 WP_000387809.1 quorum-sensing sensor histidine kinase AgrC -
  ACFIOL_RS03510 agrD 713325..713465 (-) 141 WP_000735197.1 cyclic lactone autoinducer peptide AgrD -
  ACFIOL_RS03515 - 713469..714032 (-) 564 WP_001105705.1 accessory gene regulator AgrB -
  ACFIOL_RS03520 hld 714322..714402 (+) 81 WP_000046023.1 delta-hemolysin -
  ACFIOL_RS03525 - 715001..715786 (-) 786 WP_000867941.1 carbon-nitrogen family hydrolase -
  ACFIOL_RS03530 - 716147..716773 (-) 627 WP_000522384.1 nitroreductase family protein -

Sequence

Protein


Download         Length: 238 a.a.        Molecular weight: 27905.90 Da        Isoelectric Point: 6.0927

>NTDB_id=1057003 ACFIOL_RS03500 WP_000688492.1 711273..711989(-) (agrA) [Staphylococcus aureus strain t21644]
MKIFICEDDPKQRENMVTIIKNYIMIEEKPMEIALATDNPYEVLEQAKNMNDIGCYFLDIQLSTDINGIKLGSEIRKHDP
VGNIIFVTSHSELTYLTFVYKVAAMDFIFKDDPAELRTRIIDCLETAHTRLQLLSKDNSVETIELKRGSNSVYVQYDDIM
FFESSTKSHRLIAHLDNRQIEFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKERIVYFKNKEHCYASVRNVKKI

Nucleotide


Download         Length: 717 bp        

>NTDB_id=1057003 ACFIOL_RS03500 WP_000688492.1 711273..711989(-) (agrA) [Staphylococcus aureus strain t21644]
ATGAAAATTTTCATTTGCGAAGACGATCCAAAACAAAGAGAAAACATGGTTACCATTATTAAAAATTATATAATGATAGA
AGAAAAGCCTATGGAAATTGCCCTCGCAACTGATAATCCTTATGAGGTGCTTGAGCAAGCTAAAAATATGAATGACATAG
GCTGTTACTTTTTAGATATTCAACTTTCAACTGATATTAATGGTATCAAATTAGGCAGTGAAATTCGTAAGCATGACCCA
GTTGGTAACATTATTTTCGTTACGAGTCACAGTGAACTTACCTATTTAACATTTGTCTACAAAGTTGCAGCGATGGATTT
TATTTTTAAAGATGATCCAGCAGAATTAAGAACTCGAATTATAGATTGTTTAGAAACTGCACATACACGCTTACAATTGT
TGTCTAAAGATAATAGCGTTGAAACGATTGAATTAAAACGTGGCAGTAATTCAGTGTATGTTCAATATGATGATATTATG
TTTTTTGAATCATCAACAAAATCTCACAGACTCATTGCCCATTTAGATAACCGTCAAATTGAATTTTATGGTAATTTAAA
AGAACTGAGTCAATTAGATGATCGTTTCTTTAGATGTCATAATAGCTTTGTCGTCAATCGCCATAATATTGAATCTATAG
ATTCGAAAGAGCGAATTGTCTATTTTAAAAATAAAGAACACTGCTATGCATCGGTGAGAAACGTTAAAAAAATATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-120)

LytTr DNA-binding domain (LytTR)

(151-237)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7IEW1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  agrA Staphylococcus aureus N315

100

100

1

Multiple sequence alignment