Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | R8630_RS05245 | Genome accession | NZ_AP028414 |
| Coordinates | 1014953..1015255 (+) | Length | 100 a.a. |
| NCBI ID | WP_002855822.1 | Uniprot ID | A0A1E7NY14 |
| Organism | Campylobacter jejuni strain IDH-12583 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1009953..1020255
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R8630_RS05220 (I12583_10200) | rpsR | 1010315..1010575 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| R8630_RS05225 (I12583_10210) | lon | 1010636..1013011 (-) | 2376 | WP_002856101.1 | endopeptidase La | - |
| R8630_RS05230 (I12583_10220) | - | 1013028..1013675 (-) | 648 | WP_317667076.1 | outer membrane protein assembly factor BamD | - |
| R8630_RS05235 (I12583_10230) | fliW | 1013836..1014225 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| R8630_RS05240 (I12583_10240) | proC | 1014225..1014956 (+) | 732 | WP_002855729.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| R8630_RS05245 (I12583_10250) | ctsT | 1014953..1015255 (+) | 303 | WP_002855822.1 | transformation system protein | Machinery gene |
| R8630_RS05250 (I12583_10260) | - | 1015252..1015914 (+) | 663 | WP_002866103.1 | hypothetical protein | - |
| R8630_RS05255 (I12583_10270) | - | 1015911..1016363 (+) | 453 | WP_317667078.1 | hypothetical protein | - |
| R8630_RS05260 (I12583_10280) | hemD | 1016360..1016989 (-) | 630 | WP_002856298.1 | uroporphyrinogen-III synthase | - |
| R8630_RS05265 (I12583_10290) | thiE | 1016967..1017599 (-) | 633 | WP_317667080.1 | thiamine phosphate synthase | - |
| R8630_RS05270 (I12583_10300) | thiD | 1017589..1018401 (-) | 813 | WP_002856188.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| R8630_RS05275 (I12583_10310) | - | 1018398..1019084 (-) | 687 | WP_002856040.1 | endonuclease III domain-containing protein | - |
| R8630_RS05280 (I12583_10320) | - | 1019081..1019842 (-) | 762 | WP_002856328.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12150.21 Da Isoelectric Point: 6.2957
>NTDB_id=105679 R8630_RS05245 WP_002855822.1 1014953..1015255(+) (ctsT) [Campylobacter jejuni strain IDH-12583]
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=105679 R8630_RS05245 WP_002855822.1 1014953..1015255(+) (ctsT) [Campylobacter jejuni strain IDH-12583]
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
100 |
100 |
1 |