Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   ACFIOF_RS00480 Genome accession   NZ_CP170397
Coordinates   104839..105504 (+) Length   221 a.a.
NCBI ID   WP_000697876.1    Uniprot ID   -
Organism   Staphylococcus aureus strain t3841     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 99839..110504
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFIOF_RS00455 - 101247..102008 (+) 762 WP_000323447.1 alpha/beta hydrolase -
  ACFIOF_RS00460 - 102253..102708 (+) 456 WP_000106185.1 MarR family winged helix-turn-helix transcriptional regulator -
  ACFIOF_RS00465 - 102830..102931 (+) 102 WP_000731972.1 SE2200 family small protein -
  ACFIOF_RS00470 - 102991..104415 (-) 1425 WP_000953744.1 alkaline phosphatase -
  ACFIOF_RS00475 - 104613..104813 (+) 201 WP_000604727.1 hypothetical protein -
  ACFIOF_RS00480 braR 104839..105504 (+) 666 WP_000697876.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  ACFIOF_RS00485 braS 105515..106402 (+) 888 WP_000143426.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  ACFIOF_RS00490 - 106511..107266 (+) 756 WP_000923760.1 ABC transporter ATP-binding protein -
  ACFIOF_RS00495 - 107263..109263 (+) 2001 WP_000776753.1 ABC transporter permease -
  ACFIOF_RS00500 - 109922..110035 (+) 114 WP_072384844.1 hypothetical protein -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25362.44 Da        Isoelectric Point: 4.6830

>NTDB_id=1056664 ACFIOF_RS00480 WP_000697876.1 104839..105504(+) (braR) [Staphylococcus aureus strain t3841]
MKILIVEDDFVIAESLASELKKWNYGVIVVEQFDDILSIFNQHQPQLVLLDINLPTLNGFHWCQEIRKTSNVPIIFISSR
IDNMDQIMAIQMGGDDFIEKPFNLSLTIAKIQALLRRTYDLSVANDSLTVKGCTLILDEAKVVYQEQNIQLSLTELQILK
LLFQNEDKYVSRTALIEKCWESENFIDDNTLAVNMTCLRKKLNTIGVNDFIITKKNVGYKV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=1056664 ACFIOF_RS00480 WP_000697876.1 104839..105504(+) (braR) [Staphylococcus aureus strain t3841]
ATGAAAATATTAATTGTTGAAGATGATTTTGTTATAGCAGAAAGTTTAGCATCTGAACTTAAAAAATGGAATTACGGTGT
TATTGTCGTTGAACAATTTGATGATATACTGTCTATCTTTAACCAACATCAACCTCAGCTTGTATTGCTAGATATTAATT
TGCCAACGTTAAATGGTTTTCATTGGTGTCAAGAAATCCGAAAAACATCTAATGTGCCAATTATATTTATTAGTTCCCGT
ATTGATAATATGGACCAAATTATGGCAATACAAATGGGGGGAGATGATTTTATCGAAAAGCCATTTAACTTGTCATTAAC
GATTGCCAAAATTCAAGCATTATTGAGACGAACTTATGACTTGTCAGTAGCTAATGATTCATTGACGGTTAAAGGTTGTA
CATTAATATTAGATGAAGCAAAAGTCGTGTATCAAGAACAAAACATACAGCTATCTTTGACTGAATTACAAATATTAAAG
TTATTATTTCAAAATGAAGATAAATATGTAAGTAGAACTGCTTTAATTGAAAAATGTTGGGAATCAGAAAACTTCATAGA
TGATAACACATTAGCTGTTAACATGACGTGCCTGCGTAAAAAATTAAATACTATTGGCGTTAATGATTTTATCATTACAA
AGAAAAATGTCGGATATAAAGTATAG

Domains

Predicted by InterproScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

99.548

100

0.995

Multiple sequence alignment