Detailed information NTG1056617

Bioinformatically predicted

Overview

• Name: radA
• Type: Machinery gene
• Locus tag: ACFIOJ_RS10910
• Genome accession: NZ_CP170391
• Coordinates: 2204843..2206207 (-)
• Length: 454 a.a.
• NCBI ID: WP_410532829.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain t21642
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2199843..2211207

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACFIOJ_RS10895	cysE	2200662..2201309 (-)	648	WP_001805237.1	serine O-acetyltransferase	-
ACFIOJ_RS10900	gltX	2201733..2203187 (-)	1455	WP_410532825.1	glutamate--tRNA ligase	-
ACFIOJ_RS10905	-	2203745..2204818 (-)	1074	WP_410532827.1	PIN/TRAM domain-containing protein	-
ACFIOJ_RS10910	radA	2204843..2206207 (-)	1365	WP_410532829.1	DNA repair protein RadA	Machinery gene
ACFIOJ_RS10915	-	2206691..2209147 (-)	2457	WP_000897135.1	ATP-dependent Clp protease ATP-binding subunit	-
ACFIOJ_RS10920	-	2209161..2210168 (-)	1008	WP_410534067.1	protein arginine kinase	-
ACFIOJ_RS10925	-	2210158..2210724 (-)	567	WP_054190487.1	UvrB/UvrC motif-containing protein	-
ACFIOJ_RS10930	-	2210743..2211204 (-)	462	WP_000551762.1	CtsR family transcriptional regulator	-

Sequence

Protein

• Length: 454 a.a.
• Molecular weight: 49863.37 Da
• Isoelectric Point: 7.0049

>NTDB_id=1056617 ACFIOJ_RS10910 WP_410532829.1 2204843..2206207(-) (radA) [Staphylococcus aureus strain t21642]
MAKKKVIFECMACGYQSPKWMGKCPNCGAWNQMEEIVEKAANPKHGVKTKELAGKVQKLNSIKHETTPRVLTDSAEFNRV
LGGGIVSGSLVLIGGDPGIGKSTLLLQICASLSQKKKVLYITGEESLSQTKLRAERLDEDSSELQVLAETDLEVIYQTVK
EEQPDLLVVDSIQTIYHPEISSAPGSVSQVRESTQSLMNIAKQMNIATFIVGHVTKEGQIAGPRLLEHMVDTVLYFEGDE
HHAYRILRAVKNRFGSTNEMGIFEMKQSGLKGVNNPSEMFLEERSTNVPGSTIVATMEGTRPLLIEVQALVTPTTFNNPR
RMATGIDHNRLSLLMAVLEKKENYLLQQQDAYIKVAGGVRLTEPAVDLSVIVATASSFKDKAVDGLDCYIGEVGLTGEVR
RVSRIEQRVQEAAKLGFKRVIIPKNNIGGWTYPEGIQVIGVTTVHEALSFALHS

Nucleotide

• Length: 1365 bp

>NTDB_id=1056617 ACFIOJ_RS10910 WP_410532829.1 2204843..2206207(-) (radA) [Staphylococcus aureus strain t21642]
TTGGCCAAGAAAAAAGTGATTTTTGAATGTATGGCTTGTGGTTATCAATCTCCTAAATGGATGGGAAAATGTCCTAATTG
TGGTGCTTGGAATCAAATGGAGGAAATTGTTGAAAAAGCAGCCAATCCTAAACATGGAGTGAAAACCAAGGAATTAGCAG
GGAAAGTACAAAAATTAAATAGTATTAAACATGAAACAACGCCGAGAGTGTTAACAGATTCAGCAGAATTCAACCGTGTA
TTAGGTGGAGGTATTGTGAGCGGATCGTTAGTACTTATTGGTGGGGATCCAGGTATTGGTAAGTCAACGTTACTTTTACA
AATTTGTGCATCGTTATCTCAAAAGAAAAAAGTACTATATATTACTGGAGAAGAATCGCTTAGTCAGACTAAATTACGTG
CAGAGCGATTAGATGAAGATTCAAGTGAATTGCAAGTATTAGCTGAAACAGATCTTGAAGTTATTTATCAAACAGTAAAA
GAAGAACAACCTGATTTACTAGTAGTGGATTCGATTCAAACAATATATCATCCTGAAATCAGCTCTGCGCCAGGTTCTGT
TTCACAAGTTCGTGAAAGTACACAAAGTTTAATGAATATCGCTAAACAAATGAACATTGCAACTTTTATAGTGGGCCATG
TAACGAAAGAAGGTCAAATTGCTGGCCCAAGATTGCTAGAACATATGGTTGATACTGTGCTTTATTTTGAAGGCGATGAA
CACCACGCATATCGAATTTTGCGAGCTGTTAAAAACCGTTTTGGTTCAACGAATGAAATGGGAATCTTCGAAATGAAGCA
AAGTGGATTAAAAGGTGTAAATAATCCATCTGAAATGTTTTTAGAAGAACGTTCAACAAATGTTCCAGGTTCAACAATTG
TTGCAACCATGGAGGGAACCAGACCACTTTTAATAGAAGTTCAAGCGCTGGTAACTCCAACGACTTTTAACAATCCGAGA
CGAATGGCAACAGGGATTGATCATAATCGATTAAGTTTGTTGATGGCTGTTTTGGAAAAGAAAGAAAATTATCTATTACA
ACAACAAGATGCTTATATCAAAGTAGCTGGCGGTGTAAGGTTAACGGAGCCAGCAGTTGATTTAAGTGTAATTGTAGCAA
CTGCGTCTAGCTTTAAAGATAAAGCTGTCGACGGATTAGATTGCTATATTGGAGAAGTTGGTTTAACGGGTGAGGTACGT
CGTGTATCTCGGATAGAACAACGCGTGCAAGAGGCTGCAAAACTAGGTTTCAAACGTGTAATTATTCCTAAAAATAATAT
AGGCGGATGGACATATCCTGAAGGTATACAAGTAATAGGTGTAACTACTGTACATGAAGCATTGTCATTTGCTCTTCATT
CATAA

Domains

Predicted by InterproScan.

• Rubredoxin metal binding domain (Zn_ribbon_LapB) (8-35)

• Subunit ChlI of Mg-chelatase (ChlI) (359-426)

• AAA domain (AAA_25) (77-218)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
radA	Bacillus subtilis subsp. subtilis str. 168	66.449	100	0.672
radA	Streptococcus pneumoniae Rx1	61.83	98.678	0.61
radA	Streptococcus pneumoniae D39	61.83	98.678	0.61
radA	Streptococcus pneumoniae R6	61.83	98.678	0.61
radA	Streptococcus pneumoniae TIGR4	61.83	98.678	0.61
radA	Streptococcus mitis NCTC 12261	61.83	98.678	0.61
radA	Streptococcus mitis SK321	61.83	98.678	0.61