Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   ACFIOJ_RS00460 Genome accession   NZ_CP170391
Coordinates   105239..105904 (+) Length   221 a.a.
NCBI ID   WP_054189714.1    Uniprot ID   -
Organism   Staphylococcus aureus strain t21642     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 100239..110904
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFIOJ_RS00435 - 101648..102409 (+) 762 Protein_86 alpha/beta hydrolase -
  ACFIOJ_RS00440 - 102654..103109 (+) 456 WP_410533204.1 MarR family winged helix-turn-helix transcriptional regulator -
  ACFIOJ_RS00445 - 103230..103331 (+) 102 WP_000731976.1 SE2200 family small protein -
  ACFIOJ_RS00450 - 103391..104815 (-) 1425 WP_054189717.1 alkaline phosphatase -
  ACFIOJ_RS00455 - 105013..105213 (+) 201 WP_054189715.1 hypothetical protein -
  ACFIOJ_RS00460 braR 105239..105904 (+) 666 WP_054189714.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  ACFIOJ_RS00465 braS 105915..106802 (+) 888 WP_054189713.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  ACFIOJ_RS00470 - 106911..107666 (+) 756 WP_054189712.1 ABC transporter ATP-binding protein -
  ACFIOJ_RS00475 - 107663..109663 (+) 2001 WP_410533205.1 FtsX-like permease family protein -
  ACFIOJ_RS00480 - 110321..110404 (+) 84 Protein_95 hypothetical protein -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25444.57 Da        Isoelectric Point: 5.0976

>NTDB_id=1056584 ACFIOJ_RS00460 WP_054189714.1 105239..105904(+) (braR) [Staphylococcus aureus strain t21642]
MKILIVEDDFVIAESLASELKKWNYDVIVVKQFNDILSIFNQHQPQLVLLDINLPTLNGFHWCQEIRKTSNVPIIFISSR
IDNMDQIMAIQMGGDDFIEKPFNLSLTIAKIQALLRRTYDLSVANDSLTVKGCTLILDEAKVVYQEQSIQLSLTELQILK
LLFQNEDKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLNTIGVNDFIITKKNVGYKV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=1056584 ACFIOJ_RS00460 WP_054189714.1 105239..105904(+) (braR) [Staphylococcus aureus strain t21642]
ATGAAAATATTAATTGTTGAAGATGATTTTGTTATAGCAGAAAGTTTAGCATCTGAACTTAAAAAATGGAATTACGATGT
TATTGTCGTTAAACAATTTAATGATATACTGTCTATCTTTAACCAACATCAACCTCAGCTTGTATTGCTAGATATTAATT
TGCCAACGTTAAATGGTTTTCATTGGTGTCAAGAAATCCGAAAAACATCTAATGTGCCAATTATATTTATTAGTTCCCGT
ATTGATAATATGGACCAAATTATGGCAATACAAATGGGGGGAGATGATTTTATCGAAAAACCATTTAATTTGTCATTAAC
GATTGCCAAAATTCAAGCATTATTGAGACGAACTTATGACTTATCAGTAGCTAATGATTCATTGACGGTTAAAGGTTGTA
CATTAATATTAGATGAAGCAAAAGTCGTGTATCAAGAACAAAGCATACAGCTATCTTTGACTGAATTACAAATATTAAAG
TTATTATTTCAAAATGAAGATAAATATGTGAGTAGAACTGCTTTAATTGAAAAATGTTGGGAATCAGAAAACTTCATAGA
TGATAACACATTAGCTGTTAATATGACACGTCTGCGTAAAAAATTAAATACTATTGGCGTTAATGATTTTATCATTACAA
AGAAAAATGTCGGATATAAAGTATAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-111)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

98.19

100

0.982

Multiple sequence alignment