Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA/nlmT   Type   Regulator
Locus tag   DK92_RS07495 Genome accession   NZ_CP007561
Coordinates   1523681..1524160 (-) Length   159 a.a.
NCBI ID   WP_324293905.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NGAS596     
Function   transport of ComC (predicted from homology)   
Competence regulation

Genomic Context

Location: 1518681..1529160
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DK92_RS07475 (DK92_07695) - 1518841..1519446 (-) 606 WP_002982799.1 response regulator -
  DK92_RS07480 (DK92_07700) - 1519427..1520989 (-) 1563 WP_047235972.1 ATP-binding protein -
  DK92_RS07485 (DK92_07705) - 1521029..1522945 (-) 1917 WP_047235973.1 FtsX-like permease family protein -
  DK92_RS07490 (DK92_07710) - 1522947..1523684 (-) 738 WP_047235974.1 ABC transporter ATP-binding protein -
  DK92_RS07495 (DK92_07715) comA/nlmT 1523681..1524160 (-) 480 WP_324293905.1 ATP-binding cassette domain-containing protein Regulator
  DK92_RS07500 (DK92_07720) - 1524216..1525841 (-) 1626 WP_047235976.1 DUF4135 domain-containing protein -
  DK92_RS07505 (DK92_07725) - 1525925..1526080 (-) 156 WP_038432550.1 type A2 lanthipeptide -
  DK92_RS07510 (DK92_07730) lacG 1526585..1527991 (-) 1407 WP_047235977.1 6-phospho-beta-galactosidase -

Sequence

Protein


Download         Length: 159 a.a.        Molecular weight: 18375.99 Da        Isoelectric Point: 6.3326

>NTDB_id=105656 DK92_RS07495 WP_324293905.1 1523681..1524160(-) (comA/nlmT) [Streptococcus pyogenes strain NGAS596]
MFDGDVMYNISLGRESVSGEQVIETCKRVSIYDDIISMPMKFHTPLFRDNPSLSGGQKQRISLARELVTTPRILVLDEPT
SALDVKTERIIQKNVEALHCTRVLVTHRLNTVEKADKILIMDNGKIIDYGSHHCLYKNNEYYRDLYDSYMNNYQEEGIK

Nucleotide


Download         Length: 480 bp        

>NTDB_id=105656 DK92_RS07495 WP_324293905.1 1523681..1524160(-) (comA/nlmT) [Streptococcus pyogenes strain NGAS596]
ATATTCGATGGGGATGTGATGTATAATATTTCGCTAGGGAGAGAATCTGTTTCAGGAGAACAGGTTATTGAAACTTGTAA
AAGGGTATCAATATATGACGATATCATAAGTATGCCAATGAAGTTTCATACTCCACTTTTTCGAGATAATCCATCACTAT
CTGGGGGGCAAAAACAACGAATTTCTTTAGCAAGAGAACTTGTAACTACCCCTAGAATCTTAGTTCTTGACGAACCGACA
TCAGCTTTAGATGTAAAAACTGAAAGAATAATCCAAAAAAATGTTGAGGCTTTACATTGTACGAGGGTTTTGGTTACCCA
TAGACTTAATACAGTTGAAAAAGCTGATAAGATTTTAATAATGGATAATGGCAAAATTATTGACTATGGTAGTCATCATT
GTTTATATAAAAATAATGAGTACTATCGTGATTTATATGATTCGTACATGAACAACTATCAGGAGGAAGGGATAAAATGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(36-81)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA/nlmT Streptococcus mutans UA159

40.268

93.711

0.377
  rcrQ Streptococcus mutans UA159

39.333

94.34

0.371

Multiple sequence alignment