Detailed information NTG1056453

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: O4J27_RS17750
• Genome accession: NZ_CP170372
• Coordinates: 3581451..3582596 (+)
• Length: 381 a.a.
• NCBI ID: WP_074534220.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain P12
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3576451..3587596

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
O4J27_RS17730 (O4J27_17730)	-	3577348..3577776 (-)	429	WP_032869448.1	DUF1934 domain-containing protein	-
O4J27_RS17735 (O4J27_17735)	-	3577930..3578442 (+)	513	Protein_3432	bacteriocin biosynthesis protein AlbG	-
O4J27_RS17740 (O4J27_17740)	-	3578449..3579825 (-)	1377	WP_032875890.1	YncE family protein	-
O4J27_RS17745 (O4J27_17745)	-	3579865..3581220 (-)	1356	WP_032875887.1	YncE family protein	-
O4J27_RS17750 (O4J27_17750)	rapF	3581451..3582596 (+)	1146	WP_074534220.1	Rap family tetratricopeptide repeat protein	Regulator
O4J27_RS17755 (O4J27_17755)	-	3582580..3582699 (+)	120	WP_017418707.1	PhrC/PhrF family phosphatase-inhibitory pheromone	-
O4J27_RS17760 (O4J27_17760)	speB	3582822..3583694 (-)	873	WP_032875884.1	agmatinase	-
O4J27_RS17765 (O4J27_17765)	speE	3583753..3584583 (-)	831	WP_003151052.1	spermidine synthase	-
O4J27_RS17770 (O4J27_17770)	-	3584783..3586855 (+)	2073	WP_032875881.1	transglycosylase domain-containing protein	-
O4J27_RS17775 (O4J27_17775)	-	3586880..3587313 (-)	434	Protein_3440	hypothetical protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45737.21 Da
• Isoelectric Point: 5.0614

>NTDB_id=1056453 O4J27_RS17750 WP_074534220.1 3581451..3582596(+) (rapF) [Bacillus velezensis strain P12]
MASVLSSSAVGEKINEWYMYIRRFSIPDAEYLRREIKEELAGLEDDQDLHLYYSLMEFRHNLMLEYLEPLESQRIEEQPR
LSDLLADIDKKQARLTGRLDYYFNFFRGMYELECREYLSAIQFFKKAESKLTYVKDHIEKAEFYFKMSEVYYYMKQTYVS
MDYARQAYLIYKDAEKYNIRLTQCHSLFGANYLDVKQYDHAISHFQKAYTMAELEQQPQLMGRTLFNIALCHNNQNNKVE
AIPHLKEAIAVFEKAQMSHSLPQPYFLLTQIYFKLKNIDNAYDYHKKGISICKEIDDIIYEEKFKFLEYLYMPDPRDTLI
NDCLHFLENKLMYADIEELALDVAKYYYTQEEYKKASVYFLKVEEARQQIEGGVNLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=1056453 O4J27_RS17750 WP_074534220.1 3581451..3582596(+) (rapF) [Bacillus velezensis strain P12]
GTGGCGAGTGTTTTATCATCTTCAGCGGTTGGAGAAAAAATCAACGAATGGTATATGTACATTCGAAGGTTCAGCATCCC
GGACGCCGAGTACTTGCGGAGAGAAATCAAAGAAGAACTTGCAGGTCTGGAAGATGATCAGGATCTTCATCTATACTATT
CTCTCATGGAATTCCGTCACAATCTGATGCTCGAATACCTCGAACCGCTGGAATCGCAGCGGATAGAAGAACAGCCGAGA
CTATCGGATCTGCTCGCGGATATTGATAAAAAGCAGGCCCGGCTGACCGGACGTCTTGATTATTATTTTAATTTTTTCCG
GGGGATGTATGAGCTGGAATGCCGTGAATATCTTTCAGCGATTCAGTTTTTTAAGAAAGCTGAAAGCAAACTGACGTACG
TTAAAGATCATATAGAAAAAGCTGAATTTTACTTTAAAATGTCAGAAGTCTATTATTATATGAAACAAACTTATGTATCG
ATGGATTATGCGCGGCAGGCTTATTTAATTTATAAAGATGCAGAAAAATATAATATTAGATTAACCCAGTGCCATTCTTT
ATTTGGGGCTAATTATCTTGATGTAAAGCAATACGATCACGCGATTTCCCACTTTCAAAAGGCATATACGATGGCTGAAT
TGGAGCAGCAGCCGCAATTAATGGGGAGGACACTTTTTAACATCGCTTTATGCCATAATAATCAAAACAATAAAGTCGAG
GCTATTCCCCATTTAAAAGAAGCCATAGCTGTTTTTGAAAAAGCTCAAATGAGTCATTCACTTCCGCAGCCCTACTTCTT
ACTTACACAGATTTATTTTAAGTTAAAAAATATAGATAACGCGTACGATTATCATAAAAAAGGTATCTCAATATGTAAGG
AAATAGATGATATAATTTACGAGGAAAAATTTAAATTTTTAGAATACTTGTATATGCCGGATCCAAGAGATACATTAATA
AACGATTGTCTGCATTTTCTTGAAAATAAATTGATGTATGCTGATATTGAGGAATTAGCCCTTGATGTAGCTAAATATTA
TTACACACAAGAAGAATATAAAAAAGCTTCTGTCTACTTTTTAAAGGTTGAAGAAGCCAGACAGCAGATCGAAGGAGGAG
TGAATTTATATGAAATTGAAGTATAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

• Tetratricopeptide repeat (TPR_12) (188-254)

• Tetratricopeptide repeat (TPR_8) (265-293)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	70.079	100	0.701
rapC	Bacillus subtilis subsp. subtilis str. 168	54.211	99.738	0.541