Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | R8609_RS05710 | Genome accession | NZ_AP028412 |
| Coordinates | 1103900..1104202 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain IDH-12128 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1098900..1109202
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R8609_RS05685 (I12128_11270) | rpsR | 1099262..1099522 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| R8609_RS05690 (I12128_11280) | lon | 1099583..1101958 (-) | 2376 | WP_002853487.1 | endopeptidase La | - |
| R8609_RS05695 (I12128_11290) | - | 1101975..1102622 (-) | 648 | WP_002860191.1 | outer membrane protein assembly factor BamD | - |
| R8609_RS05700 (I12128_11300) | fliW | 1102783..1103172 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| R8609_RS05705 (I12128_11310) | proC | 1103172..1103903 (+) | 732 | WP_317694077.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| R8609_RS05710 (I12128_11320) | ctsT | 1103900..1104202 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| R8609_RS05715 (I12128_11330) | - | 1104199..1104861 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| R8609_RS05720 (I12128_11340) | - | 1104858..1105310 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| R8609_RS05725 (I12128_11350) | hemD | 1105307..1105936 (-) | 630 | WP_002869541.1 | uroporphyrinogen-III synthase | - |
| R8609_RS05730 (I12128_11360) | thiE | 1105914..1106546 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| R8609_RS05735 (I12128_11370) | thiD | 1106536..1107348 (-) | 813 | WP_002869542.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| R8609_RS05740 (I12128_11380) | - | 1107345..1108031 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| R8609_RS05745 (I12128_11390) | - | 1108028..1108789 (-) | 762 | WP_032585146.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=105624 R8609_RS05710 WP_002853046.1 1103900..1104202(+) (ctsT) [Campylobacter jejuni strain IDH-12128]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=105624 R8609_RS05710 WP_002853046.1 1103900..1104202(+) (ctsT) [Campylobacter jejuni strain IDH-12128]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |