Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ABZP12_RS05670 Genome accession   NZ_CP170252
Coordinates   1372216..1372617 (+) Length   133 a.a.
NCBI ID   WP_005913706.1    Uniprot ID   A0AAI7ZH35
Organism   Xanthomonas euvesicatoria strain Xanthomonas     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1367216..1377617
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABZP12_RS05645 (ABZP12_01128) tsaB 1367916..1368635 (+) 720 WP_042841159.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -
  ABZP12_RS05650 (ABZP12_01129) - 1368632..1368990 (+) 359 Protein_1107 ADP-ribosylglycohydrolase family protein -
  ABZP12_RS05655 (ABZP12_01130) - 1369258..1369815 (+) 558 Protein_1108 ADP-ribosylglycohydrolase family protein -
  ABZP12_RS05660 (ABZP12_01131) - 1370157..1371032 (-) 876 WP_042841623.1 energy transducer TonB -
  ABZP12_RS05665 (ABZP12_01132) gshB 1371029..1371979 (-) 951 WP_008575184.1 glutathione synthase -
  ABZP12_RS05670 (ABZP12_01133) pilG 1372216..1372617 (+) 402 WP_005913706.1 twitching motility response regulator PilG Regulator
  ABZP12_RS05675 (ABZP12_01134) - 1372635..1372997 (+) 363 WP_005913708.1 PleD family two-component system response regulator -
  ABZP12_RS05680 (ABZP12_01135) - 1372997..1373527 (+) 531 WP_003482487.1 chemotaxis protein CheW -
  ABZP12_RS05685 (ABZP12_01136) - 1373567..1375603 (+) 2037 WP_386264668.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14667.03 Da        Isoelectric Point: 6.9539

>NTDB_id=1056096 ABZP12_RS05670 WP_005913706.1 1372216..1372617(+) (pilG) [Xanthomonas euvesicatoria strain Xanthomonas]
MSENIAAGGELAGLKVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKSTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLSAIRTYVHA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=1056096 ABZP12_RS05670 WP_005913706.1 1372216..1372617(+) (pilG) [Xanthomonas euvesicatoria strain Xanthomonas]
ATGAGTGAAAACATTGCTGCGGGTGGGGAACTCGCAGGACTGAAGGTGATGGTGATCGATGATTCGAAAACCATTCGCCG
CACCGCCGAAACGCTGCTGAAGCGGGAAGGTTGTGAAGTAGTGACAGCAACGGATGGTTTCGAGGCACTGGCCAAAATTG
CGGACCAGCAACCTCAGATCATTTTCGTCGACATCATGATGCCGCGCCTGGATGGGTACCAGACGTGCGCGTTGATCAAG
GGCAACCAGCTCTTCAAATCGACGCCGGTGATCATGTTGTCGTCCAAGGACGGCCTGTTCGACAAGGCTCGCGGCCGCAT
CGTAGGTTCCGAGCAATATCTGACCAAGCCGTTCACCCGTGAAGAACTACTGAGCGCGATCCGCACGTACGTCCACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.207

90.977

0.684

Multiple sequence alignment