Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | ACFDHS_RS07210 | Genome accession | NZ_CP170235 |
| Coordinates | 1454304..1455278 (+) | Length | 324 a.a. |
| NCBI ID | WP_257070565.1 | Uniprot ID | - |
| Organism | Staphylococcus hyicus strain SC362 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1449304..1460278
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACFDHS_RS07175 (ACFDHS_07175) | rpmG | 1449836..1450000 (+) | 165 | WP_257053265.1 | 50S ribosomal protein L33 | - |
| ACFDHS_RS07180 (ACFDHS_07180) | - | 1450113..1450652 (+) | 540 | WP_119635809.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| ACFDHS_RS07185 (ACFDHS_07185) | - | 1450670..1452109 (+) | 1440 | WP_305849953.1 | rhomboid family intramembrane serine protease | - |
| ACFDHS_RS07190 (ACFDHS_07190) | - | 1452111..1452314 (+) | 204 | WP_039645571.1 | YqgQ family protein | - |
| ACFDHS_RS07195 (ACFDHS_07195) | - | 1452311..1453297 (+) | 987 | WP_039645573.1 | ROK family glucokinase | - |
| ACFDHS_RS07200 (ACFDHS_07200) | - | 1453299..1453610 (+) | 312 | WP_039645576.1 | MTH1187 family thiamine-binding protein | - |
| ACFDHS_RS07205 (ACFDHS_07205) | - | 1453625..1454248 (+) | 624 | WP_107632997.1 | MBL fold metallo-hydrolase | - |
| ACFDHS_RS07210 (ACFDHS_07210) | comGA | 1454304..1455278 (+) | 975 | WP_257070565.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| ACFDHS_RS07215 (ACFDHS_07215) | comGB | 1455247..1456263 (+) | 1017 | WP_380572239.1 | competence type IV pilus assembly protein ComGB | - |
| ACFDHS_RS07220 (ACFDHS_07220) | comGC | 1456326..1456646 (+) | 321 | WP_107632995.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| ACFDHS_RS07225 (ACFDHS_07225) | comGD | 1456636..1457067 (+) | 432 | WP_209260663.1 | competence type IV pilus minor pilin ComGD | - |
| ACFDHS_RS07230 (ACFDHS_07230) | - | 1457260..1457742 (+) | 483 | WP_039645587.1 | competence type IV pilus minor pilin ComGF | - |
| ACFDHS_RS07235 (ACFDHS_07235) | - | 1457726..1457923 (+) | 198 | WP_039645590.1 | hypothetical protein | - |
| ACFDHS_RS07240 (ACFDHS_07240) | - | 1457901..1458431 (+) | 531 | WP_107632993.1 | shikimate kinase | - |
| ACFDHS_RS07245 (ACFDHS_07245) | gcvT | 1458586..1459677 (+) | 1092 | WP_107632992.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 37003.84 Da Isoelectric Point: 7.2046
>NTDB_id=1055750 ACFDHS_RS07210 WP_257070565.1 1454304..1455278(+) (comGA) [Staphylococcus hyicus strain SC362]
MQLLIDHVVQYAITHEASDIHFIPNSSQVDVKLRIKDYLKPYDTLNLETYQKMLTLLKFKAGLDVSSRHKAQSGRYIYEY
ETLYYLRVSTLPLNLGNESCVIRITPQLFHTDINQTAYDIQKTMEKKQGLILFSGPTGAGKSTLMYQMVVYAKEKLNLNI
ITIEDPVEQLLNGVTQISVNEKADITYGNSLKAILRCDPDVILIGEIRDGLIAKDVIQASLSGHLVLSTIHANDCKGVLL
RLIEMGITKQDLLQALNLIVNQRLITTNDNSRKLVYELMSQDDIRYFLDHNFVLPKHFESLNDKLTELKKKGEIDDVTLR
KYQK
MQLLIDHVVQYAITHEASDIHFIPNSSQVDVKLRIKDYLKPYDTLNLETYQKMLTLLKFKAGLDVSSRHKAQSGRYIYEY
ETLYYLRVSTLPLNLGNESCVIRITPQLFHTDINQTAYDIQKTMEKKQGLILFSGPTGAGKSTLMYQMVVYAKEKLNLNI
ITIEDPVEQLLNGVTQISVNEKADITYGNSLKAILRCDPDVILIGEIRDGLIAKDVIQASLSGHLVLSTIHANDCKGVLL
RLIEMGITKQDLLQALNLIVNQRLITTNDNSRKLVYELMSQDDIRYFLDHNFVLPKHFESLNDKLTELKKKGEIDDVTLR
KYQK
Nucleotide
Download Length: 975 bp
>NTDB_id=1055750 ACFDHS_RS07210 WP_257070565.1 1454304..1455278(+) (comGA) [Staphylococcus hyicus strain SC362]
ATGCAATTATTAATTGACCATGTCGTACAATATGCCATAACACATGAAGCGTCGGACATTCATTTTATTCCGAATTCATC
ACAAGTCGATGTAAAGCTAAGAATTAAAGATTATTTAAAACCTTATGACACATTAAATTTAGAGACGTATCAAAAAATGT
TAACATTATTAAAATTCAAAGCTGGACTTGATGTATCTTCTAGACATAAAGCACAAAGTGGGCGTTATATCTACGAATAT
GAGACATTATATTATTTACGTGTTTCAACACTACCATTAAATTTAGGCAATGAAAGCTGTGTCATTCGCATTACCCCGCA
ATTGTTTCACACTGATATTAATCAAACCGCTTATGACATACAAAAAACCATGGAAAAGAAACAAGGATTAATATTATTTA
GTGGTCCAACAGGTGCAGGCAAAAGTACATTAATGTATCAAATGGTGGTATACGCTAAAGAAAAACTCAACTTAAATATC
ATTACAATAGAAGATCCAGTCGAACAATTGCTAAATGGAGTAACACAAATATCTGTAAATGAAAAAGCTGATATTACTTA
TGGAAATTCATTAAAAGCAATATTACGGTGTGATCCAGATGTAATTTTAATTGGTGAAATAAGAGATGGTTTAATTGCAA
AAGATGTCATTCAAGCAAGTTTGAGTGGCCATTTAGTTTTATCGACTATACACGCAAATGATTGCAAAGGCGTATTATTA
CGCCTTATTGAAATGGGAATTACGAAACAAGATTTATTACAAGCACTTAATCTTATAGTAAATCAGCGTTTAATTACGAC
AAATGACAATTCAAGGAAACTCGTTTATGAACTAATGTCTCAAGATGATATACGGTACTTTTTGGACCATAATTTTGTAC
TACCTAAACACTTTGAAAGTCTTAATGACAAACTGACTGAGCTAAAAAAGAAAGGAGAGATAGATGACGTCACATTACGA
AAATATCAAAAATAA
ATGCAATTATTAATTGACCATGTCGTACAATATGCCATAACACATGAAGCGTCGGACATTCATTTTATTCCGAATTCATC
ACAAGTCGATGTAAAGCTAAGAATTAAAGATTATTTAAAACCTTATGACACATTAAATTTAGAGACGTATCAAAAAATGT
TAACATTATTAAAATTCAAAGCTGGACTTGATGTATCTTCTAGACATAAAGCACAAAGTGGGCGTTATATCTACGAATAT
GAGACATTATATTATTTACGTGTTTCAACACTACCATTAAATTTAGGCAATGAAAGCTGTGTCATTCGCATTACCCCGCA
ATTGTTTCACACTGATATTAATCAAACCGCTTATGACATACAAAAAACCATGGAAAAGAAACAAGGATTAATATTATTTA
GTGGTCCAACAGGTGCAGGCAAAAGTACATTAATGTATCAAATGGTGGTATACGCTAAAGAAAAACTCAACTTAAATATC
ATTACAATAGAAGATCCAGTCGAACAATTGCTAAATGGAGTAACACAAATATCTGTAAATGAAAAAGCTGATATTACTTA
TGGAAATTCATTAAAAGCAATATTACGGTGTGATCCAGATGTAATTTTAATTGGTGAAATAAGAGATGGTTTAATTGCAA
AAGATGTCATTCAAGCAAGTTTGAGTGGCCATTTAGTTTTATCGACTATACACGCAAATGATTGCAAAGGCGTATTATTA
CGCCTTATTGAAATGGGAATTACGAAACAAGATTTATTACAAGCACTTAATCTTATAGTAAATCAGCGTTTAATTACGAC
AAATGACAATTCAAGGAAACTCGTTTATGAACTAATGTCTCAAGATGATATACGGTACTTTTTGGACCATAATTTTGTAC
TACCTAAACACTTTGAAAGTCTTAATGACAAACTGACTGAGCTAAAAAAGAAAGGAGAGATAGATGACGTCACATTACGA
AAATATCAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
58.204 |
99.691 |
0.58 |
| comGA | Staphylococcus aureus N315 |
58.204 |
99.691 |
0.58 |