Detailed information    

insolico Bioinformatically predicted

Overview

Name   braS   Type   Regulator
Locus tag   ACFDHX_RS10910 Genome accession   NZ_CP170218
Coordinates   2174866..2175777 (-) Length   303 a.a.
NCBI ID   WP_107642911.1    Uniprot ID   A0A418JLJ6
Organism   Staphylococcus hyicus strain SC392     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2169866..2180777
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFDHX_RS10890 (ACFDHX_10920) spn 2170648..2170968 (+) 321 WP_039643670.1 SPIN family peroxidase inhibitor -
  ACFDHX_RS10895 (ACFDHX_10925) - 2171200..2171826 (+) 627 WP_119635083.1 FMN-dependent NADH-azoreductase -
  ACFDHX_RS10900 (ACFDHX_10930) - 2172063..2174024 (-) 1962 WP_381418332.1 ABC transporter permease -
  ACFDHX_RS10905 (ACFDHX_10935) - 2174026..2174775 (-) 750 WP_039643665.1 ABC transporter ATP-binding protein -
  ACFDHX_RS10910 (ACFDHX_10940) braS 2174866..2175777 (-) 912 WP_107642911.1 sensor histidine kinase Regulator
  ACFDHX_RS10915 (ACFDHX_10945) braR 2175786..2176451 (-) 666 WP_119635080.1 response regulator transcription factor Regulator
  ACFDHX_RS10920 (ACFDHX_10950) - 2176582..2177019 (+) 438 WP_209260594.1 glyoxalase/bleomycin resistance/extradiol dioxygenase family protein -
  ACFDHX_RS10925 (ACFDHX_10955) - 2177605..2178522 (-) 918 WP_380572644.1 histidine kinase dimerization/phospho-acceptor domain-containing protein -
  ACFDHX_RS10930 (ACFDHX_10960) - 2178539..2179291 (-) 753 WP_167696245.1 hypothetical protein -
  ACFDHX_RS10935 (ACFDHX_10965) - 2179284..2180198 (-) 915 WP_257071197.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 303 a.a.        Molecular weight: 35427.25 Da        Isoelectric Point: 7.6622

>NTDB_id=1055600 ACFDHX_RS10910 WP_107642911.1 2174866..2175777(-) (braS) [Staphylococcus hyicus strain SC392]
MSVRFYNHILSDVCIYVLMLMLFLFISLIYDFETEAYILTLSVSLFVFSLYIIVKWAYFKKQETLKQTNERLASELQHVK
MMHRDYQRDLEHYFLTWVHQIKTPITASKLLLERNEAGMVNRVRQEITEIENYTNLALNYLKLLSHETDMVVQKVALDDI
VKPLIQRYALHFIEHRTRIHTEHLHCTVTTDAQWTKIMIEQILNNALKYAKGGDIWIEFDAHKQQLTIKDNGMGISKADL
PKIFEKGYSGTNGRLNDKSSGIGLFIVKEISEKLQHPITVQSELGVLTQFTIQFPKTSHLTIM

Nucleotide


Download         Length: 912 bp        

>NTDB_id=1055600 ACFDHX_RS10910 WP_107642911.1 2174866..2175777(-) (braS) [Staphylococcus hyicus strain SC392]
ATGTCTGTGCGCTTTTATAACCATATTTTAAGTGATGTTTGTATTTATGTACTCATGTTAATGTTGTTTTTATTTATATC
ATTAATCTATGACTTCGAAACGGAAGCCTATATTTTAACGTTATCCGTCTCACTCTTTGTGTTTAGTTTGTATATCATAG
TGAAGTGGGCCTATTTTAAAAAACAAGAAACATTAAAACAAACTAATGAGCGTTTGGCATCTGAATTGCAACACGTAAAA
ATGATGCATCGTGACTATCAACGAGATTTGGAACATTACTTTTTAACTTGGGTGCATCAAATTAAAACACCCATAACTGC
ATCCAAACTGTTGTTAGAGCGTAATGAAGCGGGGATGGTAAATCGCGTGCGTCAAGAAATTACAGAAATTGAGAATTATA
CGAATTTGGCGTTGAATTATTTAAAACTATTAAGTCATGAAACCGATATGGTTGTTCAAAAAGTCGCACTTGATGACATC
GTGAAACCGCTCATTCAACGTTATGCGTTACATTTTATTGAACATCGCACACGCATTCATACTGAACATTTACATTGTAC
GGTCACTACAGATGCACAATGGACTAAAATTATGATTGAACAAATTTTAAACAATGCTCTGAAATATGCGAAAGGTGGAG
ACATCTGGATTGAGTTTGATGCACACAAACAACAACTCACCATTAAAGATAATGGTATGGGGATTAGTAAAGCAGATTTA
CCCAAAATATTTGAAAAAGGATATTCTGGGACGAACGGGCGCCTAAATGACAAATCTAGCGGGATAGGATTGTTTATCGT
GAAAGAAATATCAGAGAAACTTCAGCATCCGATTACCGTTCAATCAGAATTAGGCGTTTTAACACAATTTACGATTCAGT
TCCCTAAAACGTCTCATCTTACAATTATGTAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(195-297)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A418JLJ6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

50.859

96.04

0.488

Multiple sequence alignment