Detailed information NTG1055492

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: ACFDAU_RS02045
• Genome accession: NZ_CP170197
• Coordinates: 417822..418859 (-)
• Length: 345 a.a.
• NCBI ID: WP_413438413.1
• Uniprot ID: -
• Organism: Sulfuriferula sp. GW1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 412822..423859

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACFDAU_RS02025 (ACFDAU_02025)	ccoS	414937..415122 (+)	186	WP_124704606.1	cbb3-type cytochrome oxidase assembly protein CcoS	-
ACFDAU_RS02030 (ACFDAU_02030)	rpoH	415340..416188 (-)	849	WP_413438410.1	RNA polymerase sigma factor RpoH	-
ACFDAU_RS02035 (ACFDAU_02035)	ftsX	416267..417175 (-)	909	WP_413438411.1	permease-like cell division protein FtsX	-
ACFDAU_RS02040 (ACFDAU_02040)	ftsE	417172..417825 (-)	654	WP_413438412.1	cell division ATP-binding protein FtsE	-
ACFDAU_RS02045 (ACFDAU_02045)	pilA	417822..418859 (-)	1038	WP_413438413.1	signal recognition particle-docking protein FtsY	Machinery gene
ACFDAU_RS02050 (ACFDAU_02050)	-	418997..420334 (+)	1338	WP_413438414.1	M16 family metallopeptidase	-
ACFDAU_RS02055 (ACFDAU_02055)	-	420334..421641 (+)	1308	WP_413438415.1	M16 family metallopeptidase	-
ACFDAU_RS02060 (ACFDAU_02060)	rsmD	421638..422213 (+)	576	WP_413438416.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
ACFDAU_RS02065 (ACFDAU_02065)	coaD	422206..422694 (+)	489	WP_413438417.1	pantetheine-phosphate adenylyltransferase	-
ACFDAU_RS02070 (ACFDAU_02070)	-	422706..422960 (+)	255	WP_124704615.1	YfhL family 4Fe-4S dicluster ferredoxin	-

Sequence

Protein

• Length: 345 a.a.
• Molecular weight: 36989.43 Da
• Isoelectric Point: 8.3693

>NTDB_id=1055492 ACFDAU_RS02045 WP_413438413.1 417822..418859(-) (pilA) [Sulfuriferula sp. GW1]
MFSFFKKSGDKPIPAEAPSTPTKSAVVDAPVPVVEVAPKSSWTQRLKQGLSRTREQFGKQLSNLFSRGGKIDADLYDELE
TILLTADVGVDASQYLLDSLRQRVKKDRLTDATQLQAALHDTLRTLLSPLEQALDVSTHKPYVIMLAGVNGAGKTTTIGK
LAKYYQAQGKSVLLAAGDTFRAAAREQLMVWGERNNVAVIAQDGGDSAAVIFDAIAAARARGIDIVLADTAGRLPTQLNL
MEEIRKVKRVIQKAEPTAPHEVLLVLDANTGQNAVTQVKAFDDALGVTGLVLTKLDGTAKGGVIAAIAKTRPHPIRFIGV
GESLEDLRPFVAQDFVDALFEGPAP

Nucleotide

• Length: 1038 bp

>NTDB_id=1055492 ACFDAU_RS02045 WP_413438413.1 417822..418859(-) (pilA) [Sulfuriferula sp. GW1]
GTGTTTAGTTTCTTCAAGAAATCCGGCGACAAGCCCATCCCTGCCGAAGCCCCCTCTACGCCTACCAAATCGGCCGTCGT
TGACGCGCCGGTGCCTGTAGTGGAGGTTGCGCCCAAATCATCCTGGACGCAGCGCCTGAAACAGGGCTTAAGCCGCACCC
GGGAACAATTTGGCAAACAGCTCAGCAACCTGTTTTCGCGCGGCGGGAAAATAGACGCGGATTTGTATGACGAACTGGAA
ACCATTCTGCTCACCGCTGATGTGGGCGTGGATGCCAGCCAGTATCTGCTCGACAGCCTGCGCCAGCGCGTCAAAAAAGA
CCGGCTCACCGACGCCACCCAATTGCAGGCTGCACTGCACGACACATTGCGTACCTTGCTTTCACCCCTCGAACAAGCAT
TGGACGTAAGCACCCACAAACCCTATGTGATCATGCTGGCAGGCGTAAATGGCGCCGGTAAAACCACCACCATCGGCAAG
CTGGCCAAATACTATCAGGCGCAAGGCAAATCCGTGTTGCTGGCAGCGGGAGATACGTTCCGCGCCGCGGCACGCGAGCA
ACTCATGGTGTGGGGTGAGCGTAACAATGTGGCGGTAATTGCGCAGGATGGCGGCGATTCGGCGGCGGTGATTTTTGATG
CCATTGCTGCCGCCCGTGCCCGCGGCATTGATATCGTGCTGGCCGACACTGCCGGCCGTCTACCCACCCAGCTCAACCTG
ATGGAGGAAATCCGCAAGGTCAAGCGGGTCATCCAGAAGGCTGAACCCACTGCCCCGCATGAAGTCTTGCTGGTGCTCGA
CGCCAACACCGGACAAAACGCAGTTACACAGGTCAAAGCGTTTGACGATGCGCTGGGTGTTACCGGCCTGGTGCTCACCA
AGCTCGACGGCACGGCCAAGGGTGGCGTGATTGCGGCCATCGCCAAAACCCGCCCGCACCCGATCCGCTTTATTGGTGTG
GGAGAAAGCCTGGAAGATTTGCGTCCGTTCGTAGCACAGGATTTTGTTGACGCTTTATTTGAGGGGCCTGCGCCATGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (57-123)

• SRP54-type protein, GTPase domain (SRP54) (142-340)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	66.118	88.116	0.583