Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   ACFC2F_RS05795 Genome accession   NZ_CP170190
Coordinates   1142424..1143050 (-) Length   208 a.a.
NCBI ID   WP_155030937.1    Uniprot ID   -
Organism   Enterobacter sichuanensis strain B36     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1137424..1148050
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFC2F_RS05780 (ACFC2F_05780) helD 1137662..1139716 (-) 2055 WP_379934393.1 DNA helicase IV -
  ACFC2F_RS05785 (ACFC2F_05785) - 1139839..1140285 (+) 447 WP_047958177.1 YccF domain-containing protein -
  ACFC2F_RS05790 (ACFC2F_05790) yccS 1140305..1142467 (+) 2163 WP_126800355.1 YccS family putative transporter -
  ACFC2F_RS05795 (ACFC2F_05795) sxy/tfoX 1142424..1143050 (-) 627 WP_155030937.1 TfoX/Sxy family DNA transformation protein Regulator
  ACFC2F_RS05800 (ACFC2F_05800) sulA 1143268..1143777 (+) 510 WP_025755976.1 SOS-induced cell division inhibitor SulA -
  ACFC2F_RS05805 (ACFC2F_05805) ompA 1144132..1145187 (+) 1056 WP_025755977.1 porin OmpA -
  ACFC2F_RS05810 (ACFC2F_05810) matP 1145250..1145702 (-) 453 WP_023332611.1 macrodomain Ter protein MatP -
  ACFC2F_RS05815 (ACFC2F_05815) - 1145889..1147649 (+) 1761 WP_379934394.1 AAA family ATPase -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 23802.36 Da        Isoelectric Point: 9.4588

>NTDB_id=1055468 ACFC2F_RS05795 WP_155030937.1 1142424..1143050(-) (sxy/tfoX) [Enterobacter sichuanensis strain B36]
MKKISYERIYKSQEYLSPLGEIHHRALFGGYTLAVDDAVFAMVSDGELYLRACEESAKYCVKNAASFLTLMKRGRPVLLN
YYRVDDGLWQDRERLLQLSSYALSAARKERNLRHQRNRLKDLPNLTFQLEVLLFEAGITNEETLRALGARASWLKMRAKN
KALSIKVLFALEGAIEGLHEAALPAGIRRELTEWFNALPEAQDNHSSR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=1055468 ACFC2F_RS05795 WP_155030937.1 1142424..1143050(-) (sxy/tfoX) [Enterobacter sichuanensis strain B36]
ATGAAAAAGATATCTTATGAACGGATTTATAAATCCCAGGAATACCTCTCTCCGCTGGGCGAAATCCATCATCGTGCGCT
GTTTGGCGGTTACACCCTGGCGGTGGATGATGCGGTCTTTGCCATGGTGTCAGACGGCGAACTATATCTTCGTGCGTGTG
AGGAAAGTGCAAAATACTGTGTAAAAAATGCCGCCTCGTTTTTAACGCTGATGAAGCGAGGTCGTCCGGTACTGCTCAAC
TATTATCGTGTTGACGACGGCTTATGGCAGGACAGAGAGCGGCTGCTTCAGCTCTCCTCGTATGCCCTCAGTGCCGCAAG
AAAAGAGCGCAACCTGCGGCATCAACGAAACCGACTTAAGGATCTGCCGAACCTGACTTTTCAGCTTGAAGTCCTGCTGT
TTGAAGCCGGTATCACCAATGAAGAGACACTCCGGGCGCTGGGCGCCAGAGCCAGCTGGCTGAAGATGCGGGCGAAAAAT
AAAGCGCTGAGTATAAAAGTGCTCTTCGCGCTGGAAGGGGCGATTGAGGGGCTGCATGAGGCGGCGCTCCCGGCAGGTAT
TCGCCGGGAGCTGACGGAGTGGTTTAATGCGCTACCTGAGGCACAGGATAATCACTCCTCCAGGTAG

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.128

97.596

0.567

Multiple sequence alignment