Detailed information
Bioinformatically predicted
Overview
| Name | luxP | Type | Regulator |
| Locus tag | LMH68_RS18635 | Genome accession | NZ_CP170176 |
| Coordinates | 811974..813068 (+) | Length | 364 a.a. |
| NCBI ID | WP_229648191.1 | Uniprot ID | - |
| Organism | Vibrio sp. F13 strain 10N.222.55.B3 | ||
| Function | autoinducer sensor (predicted from homology) Competence regulation |
||
Genomic Context
Location: 806974..818068
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LMH68_RS18605 (LMH68_018610) | - | 808700..808936 (-) | 237 | WP_017061772.1 | hypothetical protein | - |
| LMH68_RS18610 (LMH68_018615) | - | 809103..809729 (-) | 627 | WP_017066096.1 | D-Ala-D-Ala carboxypeptidase family metallohydrolase | - |
| LMH68_RS18615 (LMH68_018620) | - | 809927..810241 (-) | 315 | WP_004742367.1 | DUF496 family protein | - |
| LMH68_RS18620 (LMH68_018625) | - | 810437..810637 (+) | 201 | WP_017068647.1 | hypothetical protein | - |
| LMH68_RS18625 (LMH68_018630) | - | 810694..811350 (+) | 657 | WP_017061769.1 | YceH family protein | - |
| LMH68_RS18630 (LMH68_018635) | - | 811351..811665 (+) | 315 | WP_017061768.1 | GIY-YIG nuclease family protein | - |
| LMH68_RS18635 (LMH68_018640) | luxP | 811974..813068 (+) | 1095 | WP_229648191.1 | autoinducer 2-binding periplasmic protein LuxP | Regulator |
| LMH68_RS18640 (LMH68_018645) | luxQ | 813068..815641 (+) | 2574 | WP_229648190.1 | quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ | - |
| LMH68_RS18645 (LMH68_018650) | - | 815701..816360 (-) | 660 | WP_102332012.1 | PilZ domain-containing protein | - |
| LMH68_RS18650 (LMH68_018655) | - | 816555..816905 (+) | 351 | WP_229648189.1 | HopJ type III effector protein | - |
| LMH68_RS18655 (LMH68_018660) | - | 817040..817348 (-) | 309 | WP_229648188.1 | DUF1289 domain-containing protein | - |
Sequence
Protein
Download Length: 364 a.a. Molecular weight: 41478.83 Da Isoelectric Point: 5.2796
>NTDB_id=1055464 LMH68_RS18635 WP_229648191.1 811974..813068(+) (luxP) [Vibrio sp. F13 strain 10N.222.55.B3]
MKRLLMLFGLAVFSASALSHGTHVLNRYWEYQDYLSTFPEQRALTDKMVEAVQNHPVPLRRIQDEPITISVVYPGQQISD
YWVRNIQAFEKRLDRLKIRYQINQVFTRINADLAQQSISLQEAIENKTDYLIFTLDTTRHRKFIEYVLTSTDTKLILQNI
TTPVRAWADRQPFMYVGFDHATGSLKLADYFKQVSPPDSKYSVLYYSQGYISDARGDTFIHEVNTVTNFTLKSSFYTKSN
KDSGYQAAKISIENDKDLDFIYACSTDVALGAMEAIRESGQDILVNGWGGGSAELEAIARGDLDVTVMRMNDDTGIAMAE
AIKWDLAGLEVPTVYSGEFEIVTKEDSPERISELKQRAFRYSGH
MKRLLMLFGLAVFSASALSHGTHVLNRYWEYQDYLSTFPEQRALTDKMVEAVQNHPVPLRRIQDEPITISVVYPGQQISD
YWVRNIQAFEKRLDRLKIRYQINQVFTRINADLAQQSISLQEAIENKTDYLIFTLDTTRHRKFIEYVLTSTDTKLILQNI
TTPVRAWADRQPFMYVGFDHATGSLKLADYFKQVSPPDSKYSVLYYSQGYISDARGDTFIHEVNTVTNFTLKSSFYTKSN
KDSGYQAAKISIENDKDLDFIYACSTDVALGAMEAIRESGQDILVNGWGGGSAELEAIARGDLDVTVMRMNDDTGIAMAE
AIKWDLAGLEVPTVYSGEFEIVTKEDSPERISELKQRAFRYSGH
Nucleotide
Download Length: 1095 bp
>NTDB_id=1055464 LMH68_RS18635 WP_229648191.1 811974..813068(+) (luxP) [Vibrio sp. F13 strain 10N.222.55.B3]
ATGAAACGTTTACTGATGTTGTTTGGACTTGCCGTATTTTCTGCGTCCGCTCTTTCCCATGGTACTCATGTCCTCAATAG
GTACTGGGAATACCAAGATTATCTTTCCACTTTTCCAGAACAAAGAGCATTGACCGATAAAATGGTCGAGGCTGTACAAA
ATCACCCTGTGCCACTGAGAAGAATCCAAGACGAACCAATTACGATTTCCGTGGTGTATCCGGGTCAACAGATCTCGGAT
TACTGGGTTCGCAATATTCAAGCTTTTGAGAAGCGTCTCGATAGGCTGAAGATCCGCTATCAAATAAATCAAGTGTTTAC
CCGTATTAATGCCGATCTCGCGCAGCAGAGTATTTCGTTGCAAGAAGCGATTGAAAACAAGACGGATTATTTGATTTTCA
CGCTAGATACCACGCGCCACCGCAAGTTTATCGAGTACGTGTTGACCTCTACAGACACCAAACTGATTCTTCAAAATATC
ACGACGCCAGTGCGAGCTTGGGCAGATAGACAGCCATTTATGTATGTGGGTTTTGACCATGCGACAGGCAGCTTAAAACT
GGCGGACTATTTTAAACAAGTAAGTCCGCCAGACAGTAAGTATTCTGTTTTGTATTACTCACAAGGCTATATCAGTGATG
CGCGTGGAGATACTTTTATCCATGAAGTGAATACGGTTACCAACTTTACCCTTAAGTCTTCGTTTTACACAAAATCAAAC
AAAGACAGTGGCTACCAAGCGGCTAAAATCAGCATAGAGAACGATAAGGATCTAGACTTTATCTATGCATGTTCAACGGA
TGTCGCTCTCGGTGCAATGGAAGCGATTCGTGAATCGGGCCAAGACATCTTAGTGAATGGTTGGGGAGGCGGCTCTGCTG
AACTTGAAGCCATTGCAAGGGGCGACCTAGATGTTACTGTCATGCGTATGAACGACGATACAGGTATTGCAATGGCAGAG
GCGATCAAGTGGGATCTAGCTGGTTTGGAAGTGCCTACCGTTTACTCTGGTGAATTTGAAATTGTCACCAAGGAAGATTC
CCCAGAACGTATTTCAGAACTTAAACAGCGAGCATTTAGGTACTCAGGTCACTAA
ATGAAACGTTTACTGATGTTGTTTGGACTTGCCGTATTTTCTGCGTCCGCTCTTTCCCATGGTACTCATGTCCTCAATAG
GTACTGGGAATACCAAGATTATCTTTCCACTTTTCCAGAACAAAGAGCATTGACCGATAAAATGGTCGAGGCTGTACAAA
ATCACCCTGTGCCACTGAGAAGAATCCAAGACGAACCAATTACGATTTCCGTGGTGTATCCGGGTCAACAGATCTCGGAT
TACTGGGTTCGCAATATTCAAGCTTTTGAGAAGCGTCTCGATAGGCTGAAGATCCGCTATCAAATAAATCAAGTGTTTAC
CCGTATTAATGCCGATCTCGCGCAGCAGAGTATTTCGTTGCAAGAAGCGATTGAAAACAAGACGGATTATTTGATTTTCA
CGCTAGATACCACGCGCCACCGCAAGTTTATCGAGTACGTGTTGACCTCTACAGACACCAAACTGATTCTTCAAAATATC
ACGACGCCAGTGCGAGCTTGGGCAGATAGACAGCCATTTATGTATGTGGGTTTTGACCATGCGACAGGCAGCTTAAAACT
GGCGGACTATTTTAAACAAGTAAGTCCGCCAGACAGTAAGTATTCTGTTTTGTATTACTCACAAGGCTATATCAGTGATG
CGCGTGGAGATACTTTTATCCATGAAGTGAATACGGTTACCAACTTTACCCTTAAGTCTTCGTTTTACACAAAATCAAAC
AAAGACAGTGGCTACCAAGCGGCTAAAATCAGCATAGAGAACGATAAGGATCTAGACTTTATCTATGCATGTTCAACGGA
TGTCGCTCTCGGTGCAATGGAAGCGATTCGTGAATCGGGCCAAGACATCTTAGTGAATGGTTGGGGAGGCGGCTCTGCTG
AACTTGAAGCCATTGCAAGGGGCGACCTAGATGTTACTGTCATGCGTATGAACGACGATACAGGTATTGCAATGGCAGAG
GCGATCAAGTGGGATCTAGCTGGTTTGGAAGTGCCTACCGTTTACTCTGGTGAATTTGAAATTGTCACCAAGGAAGATTC
CCCAGAACGTATTTCAGAACTTAAACAGCGAGCATTTAGGTACTCAGGTCACTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| luxP | Vibrio cholerae strain A1552 |
62.842 |
100 |
0.632 |