Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilA   Type   Machinery gene
Locus tag   ACE1C5_RS04575 Genome accession   NZ_CP170124
Coordinates   983059..984000 (+) Length   313 a.a.
NCBI ID   WP_064619905.1    Uniprot ID   A0A7Z1A3J6
Organism   Moraxella sp. ATCC 23246     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 978059..989000
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACE1C5_RS04565 (ACE1C5_04565) - 979005..980399 (-) 1395 WP_064619902.1 pitrilysin family protein -
  ACE1C5_RS04570 (ACE1C5_04570) - 980793..982904 (+) 2112 Protein_889 PhoX family protein -
  ACE1C5_RS04575 (ACE1C5_04575) pilA 983059..984000 (+) 942 WP_064619905.1 signal recognition particle-docking protein FtsY Machinery gene
  ACE1C5_RS04580 (ACE1C5_04580) - 983997..984619 (+) 623 Protein_891 methylated-DNA--[protein]-cysteine S-methyltransferase -
  ACE1C5_RS04585 (ACE1C5_04585) - 984658..985683 (+) 1026 WP_064619911.1 quinone-dependent dihydroorotate dehydrogenase -
  ACE1C5_RS04590 (ACE1C5_04590) - 985688..986200 (+) 513 WP_064619914.1 CvpA family protein -
  ACE1C5_RS04595 (ACE1C5_04595) purF 986266..987795 (+) 1530 WP_064619917.1 amidophosphoribosyltransferase -

Sequence

Protein


Download         Length: 313 a.a.        Molecular weight: 33591.55 Da        Isoelectric Point: 4.9853

>NTDB_id=1055219 ACE1C5_RS04575 WP_064619905.1 983059..984000(+) (pilA) [Moraxella sp. ATCC 23246]
MSENEKGGWFSRMKAGLSKSSKNLSEGLVSVLVGGKEIDDELLEEVEDQLLVADIGVNATNRIIKNLTEQTARGDLIYSH
ALYKALKTELTDILTPKVAPLIIDTTKKPFVILMVGVNGVGKTTTIGKLAKRLQAEGKSVMLAAGDTFRAAATEQLQIWG
ERNGIPVVAQGHGSDSASVIFDAMQSAKAKGIDVLIADTAGRLQNKTYLMNELEKVVRVMKKGDETAPHETMIVLDAGTG
QNAINQVQVFSEAVNLTGISVTKLDGTAKGGVVFNIAQNTDIPIRFIGVGEGIDDLQPFKPKDFVDALLEKEE

Nucleotide


Download         Length: 942 bp        

>NTDB_id=1055219 ACE1C5_RS04575 WP_064619905.1 983059..984000(+) (pilA) [Moraxella sp. ATCC 23246]
ATGAGCGAAAACGAAAAAGGCGGCTGGTTTTCCCGCATGAAAGCTGGACTATCAAAGTCAAGCAAAAACTTATCAGAAGG
GCTGGTTAGTGTCTTAGTTGGTGGCAAAGAGATTGATGATGAGCTGCTTGAAGAAGTTGAAGATCAGCTACTGGTTGCTG
ATATTGGTGTCAATGCCACCAATCGTATTATCAAAAATCTCACCGAGCAGACTGCGCGTGGTGATTTGATTTACTCGCAT
GCTTTGTATAAAGCACTCAAAACCGAGCTGACCGACATTTTGACGCCAAAAGTTGCACCTTTGATTATTGATACCACCAA
AAAACCCTTCGTCATCTTGATGGTGGGCGTTAATGGCGTTGGTAAGACCACCACGATCGGCAAGCTTGCTAAGCGCCTAC
AAGCCGAAGGCAAATCAGTGATGCTTGCTGCTGGTGACACCTTTCGGGCAGCGGCGACCGAGCAGCTTCAAATCTGGGGC
GAGCGAAATGGCATCCCTGTCGTCGCTCAAGGACATGGCTCAGACAGTGCTTCGGTAATTTTTGATGCCATGCAGTCTGC
CAAGGCAAAGGGTATTGATGTGCTCATCGCTGATACAGCAGGGCGCCTACAAAATAAAACCTATCTCATGAATGAGCTTG
AAAAAGTCGTCCGCGTGATGAAAAAGGGCGACGAGACAGCCCCCCATGAGACAATGATCGTGCTAGATGCAGGCACAGGT
CAAAACGCCATTAATCAAGTGCAGGTATTTTCAGAAGCAGTGAATTTAACTGGCATCAGTGTTACAAAGCTTGATGGGAC
AGCCAAAGGTGGCGTGGTATTTAATATCGCCCAAAATACGGATATTCCCATCCGTTTTATCGGCGTTGGAGAGGGTATTG
ACGACCTACAGCCATTTAAGCCAAAAGATTTTGTTGATGCACTTTTGGAAAAAGAAGAATGA

Domains

Predicted by InterproScan.

SRP54-type protein, helical bundle domain (SRP54_N)

(26-90)

SRP54-type protein, GTPase domain (SRP54)

(109-309)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7Z1A3J6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilA Neisseria gonorrhoeae MS11

52.751

98.722

0.521

Multiple sequence alignment