Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   ACNUDU_RS02550 Genome accession   NZ_OZ197099
Coordinates   511063..511863 (-) Length   266 a.a.
NCBI ID   WP_001807805.1    Uniprot ID   -
Organism   Staphylococcus aureus isolate 23S00079-1     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 506063..516863
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACNUDU_RS02535 - 506093..507349 (-) 1257 WP_000566670.1 MrcB family domain-containing protein -
  ACNUDU_RS02540 rlmH 507671..508150 (-) 480 WP_000704775.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  ACNUDU_RS02545 adsA 508518..510836 (-) 2319 WP_374731639.1 LPXTG-anchored adenosine synthase AdsA -
  ACNUDU_RS02550 vicX 511063..511863 (-) 801 WP_001807805.1 MBL fold metallo-hydrolase Regulator
  ACNUDU_RS02555 - 512252..513040 (-) 789 WP_001104170.1 two-component system regulatory protein YycI -
  ACNUDU_RS02560 yycH 513041..514375 (-) 1335 WP_001060144.1 two-component system activity regulator YycH -
  ACNUDU_RS02565 walK 514368..516194 (-) 1827 WP_000871607.1 cell wall metabolism sensor histidine kinase WalK -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 30313.56 Da        Isoelectric Point: 6.5000

>NTDB_id=1055024 ACNUDU_RS02550 WP_001807805.1 511063..511863(-) (vicX) [Staphylococcus aureus isolate 23S00079-1]
MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFSQIDRNIKDLNGILVTHEHIDHIKGLGVLARKYQLPI
YANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDVESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIR
GSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLN
EHDIDTEKEVLLCDTDKAIPTPIYTI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=1055024 ACNUDU_RS02550 WP_001807805.1 511063..511863(-) (vicX) [Staphylococcus aureus isolate 23S00079-1]
ATGAGCCGCTTGATACGCATGAGTGTATTAGCAAGTGGTAGTACAGGTAACGCCACTTTTGTAGAAAATGAAAAAGGTAG
TCTATTAGTTGATGTTGGTTTGACTGGCAAGAAAATGGAAGAATTGTTTAGTCAAATTGACCGTAATATTAAAGATTTAA
ATGGTATTTTAGTAACCCATGAACATATTGATCATATTAAAGGATTAGGTGTTTTGGCGCGTAAATATCAATTGCCAATT
TATGCGAATGAAAAGACTTGGCAGGCAATTGAAAAGAAAGATAGTCGCATTCCTATGGATCAGAAATTTATTTTTAATCC
TTATGAAACGAAATCTATTGCAGGTTTCGATGTTGAATCGTTTAACGTGTCACATGATGCGATAGATCCGCAATTTTATA
TTTTCCATAATAACTATAAGAAGTTTACGATTTTAACGGATACGGGTTACGTGTCTGATCGTATGAAAGGTATGATACGT
GGCAGCGATGCGTTTATTTTTGAGAGTAATCATGACGTCGATATGTTGAGAATGTGTCGTTATCCATGGAAGACGAAACA
ACGTATTTTAGGCGATATGGGTCATGTATCTAATGAGGATGCGGGTCATGCGATGACAGACGTGATTACAGGTAACACGA
AACGTATTTACTTATCGCATTTATCACAAGATAATAACATGAAAGATTTGGCGCGTATGAGTGTTGGCCAAGTATTGAAC
GAACACGATATTGATACGGAAAAAGAAGTATTGCTATGTGATACGGATAAAGCTATTCCAACGCCAATATATACAATATA
A

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(14-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

49.027

96.617

0.474

Multiple sequence alignment