Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   ACE6HX_RS06720 Genome accession   NZ_CP170098
Coordinates   1349859..1350440 (+) Length   193 a.a.
NCBI ID   WP_034662739.1    Uniprot ID   A0AAE3WHV4
Organism   Bacillus pumilus strain X14-67     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1344859..1355440
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACE6HX_RS06690 (ACE6HX_06690) dapD 1344968..1345678 (+) 711 WP_375567360.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  ACE6HX_RS06695 (ACE6HX_06695) - 1345763..1346893 (+) 1131 WP_060596145.1 N-acetyldiaminopimelate deacetylase -
  ACE6HX_RS06700 (ACE6HX_06700) - 1346944..1347186 (+) 243 WP_003211408.1 YkuS family protein -
  ACE6HX_RS06705 (ACE6HX_06705) - 1347213..1348022 (-) 810 WP_060596146.1 mechanosensitive ion channel family protein -
  ACE6HX_RS06710 (ACE6HX_06710) ahpA 1348294..1348836 (+) 543 WP_034662744.1 biofilm-specific peroxidase AhpA -
  ACE6HX_RS06715 (ACE6HX_06715) - 1348919..1349377 (+) 459 WP_375567363.1 TlpA family protein disulfide reductase -
  ACE6HX_RS06720 (ACE6HX_06720) rok 1349859..1350440 (+) 582 WP_034662739.1 hypothetical protein Regulator
  ACE6HX_RS06725 (ACE6HX_06725) - 1350490..1351407 (-) 918 WP_375567366.1 sigmaE regulated sporulation protein -
  ACE6HX_RS06730 (ACE6HX_06730) - 1351492..1352073 (+) 582 WP_106038788.1 molybdenum cofactor guanylyltransferase -
  ACE6HX_RS06735 (ACE6HX_06735) - 1352103..1353119 (+) 1017 WP_106030779.1 thiazole biosynthesis adenylyltransferase ThiF -
  ACE6HX_RS06740 (ACE6HX_06740) glp 1353129..1354406 (+) 1278 WP_034662728.1 gephyrin-like molybdotransferase Glp -
  ACE6HX_RS06745 (ACE6HX_06745) mobB 1354388..1354912 (+) 525 WP_034662725.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  ACE6HX_RS06750 (ACE6HX_06750) - 1354909..1355400 (+) 492 WP_060596151.1 molybdenum cofactor biosynthesis protein MoaE -

Sequence

Protein


Download         Length: 193 a.a.        Molecular weight: 21812.80 Da        Isoelectric Point: 9.7309

>NTDB_id=1055011 ACE6HX_RS06720 WP_034662739.1 1349859..1350440(+) (rok) [Bacillus pumilus strain X14-67]
MFNEREALRLRLEQLNEAEVKVIREYQIERDAIYAKLRELDRQGTGLVSDTKKEVRTERKTDSLPVLAELAAQEMRSYQP
PAQSQSNPASSLGTGQLNGVPVGIPEGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNM
TTFMQSLIKMYPEVKKPYRGQYILEGDIQTEDE

Nucleotide


Download         Length: 582 bp        

>NTDB_id=1055011 ACE6HX_RS06720 WP_034662739.1 1349859..1350440(+) (rok) [Bacillus pumilus strain X14-67]
TTGTTTAATGAGAGGGAAGCGTTACGATTACGATTGGAACAACTAAACGAAGCAGAAGTAAAGGTCATCCGTGAATATCA
AATTGAGCGAGATGCGATTTATGCAAAATTAAGAGAATTAGACCGTCAAGGAACAGGTCTAGTGTCAGATACAAAAAAAG
AAGTGCGTACAGAAAGAAAGACGGATTCGCTGCCTGTATTAGCTGAACTGGCTGCACAAGAAATGAGAAGCTACCAGCCG
CCGGCACAATCACAATCAAATCCTGCATCATCTTTAGGAACAGGACAGCTAAACGGTGTACCTGTAGGTATTCCTGAAGG
ATCTACTAGACGCAGAAGAGGCACAGCCCGCCCTGGTTCAAAGGCAGCTAAGCTTCGTGAAGCTGCGATTAAAACGTTAA
AGCGTCATAATGCGGCGATTAAAAGCTCTGAGCTTCAAAAAGAGATTGAAAAAGAGAGCGGTCTTGAAATTCCAAATATG
ACAACGTTTATGCAAAGCTTAATTAAAATGTATCCTGAAGTGAAAAAGCCATATCGCGGACAGTATATTTTAGAAGGCGA
CATTCAAACAGAAGACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

78.421

98.446

0.772

Multiple sequence alignment