Detailed information NTG1055009

Bioinformatically predicted

Overview

• Name: clpC
• Type: Regulator
• Locus tag: ACE6HX_RS06430
• Genome accession: NZ_CP170098
• Coordinates: 1294463..1296565 (-)
• Length: 700 a.a.
• NCBI ID: WP_375567328.1
• Uniprot ID: -
• Organism: Bacillus pumilus strain X14-67
• Function: degradation of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 1289463..1301565

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACE6HX_RS06405 (ACE6HX_06405)	-	1290051..1290293 (+)	243	WP_034662891.1	aspartyl-phosphate phosphatase Spo0E family protein	-
ACE6HX_RS06410 (ACE6HX_06410)	-	1290340..1291845 (-)	1506	WP_066030978.1	ATP-binding protein	-
ACE6HX_RS06415 (ACE6HX_06415)	-	1292051..1292506 (+)	456	WP_034662884.1	MarR family winged helix-turn-helix transcriptional regulator	-
ACE6HX_RS06420 (ACE6HX_06420)	motB	1292536..1293300 (-)	765	WP_060596120.1	flagellar motor protein MotB	-
ACE6HX_RS06425 (ACE6HX_06425)	motA	1293293..1294087 (-)	795	WP_034662877.1	flagellar motor stator protein MotA	-
ACE6HX_RS06430 (ACE6HX_06430)	clpC	1294463..1296565 (-)	2103	WP_375567328.1	AAA family ATPase	Regulator
ACE6HX_RS06435 (ACE6HX_06435)	-	1296809..1297852 (+)	1044	WP_375567330.1	hypothetical protein	-
ACE6HX_RS06440 (ACE6HX_06440)	queC	1298128..1298784 (+)	657	WP_024424683.1	7-cyano-7-deazaguanine synthase QueC	-
ACE6HX_RS06445 (ACE6HX_06445)	queD	1298785..1299225 (+)	441	WP_060596123.1	6-carboxytetrahydropterin synthase QueD	-
ACE6HX_RS06450 (ACE6HX_06450)	queE	1299218..1299949 (+)	732	WP_034662862.1	7-carboxy-7-deazaguanine synthase QueE	-
ACE6HX_RS06455 (ACE6HX_06455)	queF	1299965..1300462 (+)	498	WP_003211403.1	preQ(1) synthase	-
ACE6HX_RS06460 (ACE6HX_06460)	-	1300733..1300951 (+)	219	WP_034662856.1	hypothetical protein	-
ACE6HX_RS06465 (ACE6HX_06465)	-	1301075..1301263 (-)	189	WP_003211747.1	DUF2187 family protein	-

Sequence

Protein

• Length: 700 a.a.
• Molecular weight: 77969.51 Da
• Isoelectric Point: 5.0393

>NTDB_id=1055009 ACE6HX_RS06430 WP_375567328.1 1294463..1296565(-) (clpC) [Bacillus pumilus strain X14-67]
MRCQHCQVNEATIRLNMQVNSSRSQMVLCEDCYTSLMEQSKMKMGPQLFGGSSFFSEQAGHAQSVEQPKQKGLLDELGRN
LTDGANSGLIDPVIGRDEEVARVIEILNRRNKNNPVLIGEPGVGKTAIAEGLALKIASGDVPNKLKNKQIYLLDVSSLVA
NTGIRGQFEERMKQLIKELQSRKNIILFVDEIHLLVGAGSAEGSMDAGNILKPALARGELQLVGATTLKEYRQIEKDAAL
ERRFQPVIVDEPTQDEAVEILKGIQDKYESYHGVTYSDEAIQACVQLSSRYIQDRHLPDKAIDLMDEAGSKANLSIDAAS
EDELTNRLTEIAAEKQAALKEEQYEKAAKLRDEEEAIEARLQNKTNDKEHVVTAEAIQAIVEQKTGIPVGKLQADEQTKM
KEMDVRLKARVIGQEHAVEKVAKAVKRSRAGLKSKHRPTGSFLFVGPTGVGKTELSKTLAEELFGSRDAIIRLDMSEYME
KHSVSKLIGSPPGYVGHDEAGQLTEKVRRKPYSIILLDEIEKAHPDVQHMFLQIMEDGRLTDSQGRTVSFKDTAIIMTSN
AGSTDKTVKVGFQSDQEEAIEEQSLIDSLSAYFKPEFLNRFDSIIQFDSLDRDDLVKIVDLLLNELSEQLKEQHLTVHVS
KEAKEKIAELGYHPAFGARPLRRTIQEHVEDQMTEILLEEEKLSGFTVDVEDNEIVVKKG

Nucleotide

• Length: 2103 bp

>NTDB_id=1055009 ACE6HX_RS06430 WP_375567328.1 1294463..1296565(-) (clpC) [Bacillus pumilus strain X14-67]
ATGCGTTGTCAACATTGTCAAGTAAATGAAGCAACTATTCGCCTGAATATGCAAGTGAATTCGTCCCGGAGCCAAATGGT
TTTATGTGAAGACTGCTACACCTCTTTGATGGAGCAATCAAAAATGAAAATGGGACCTCAATTGTTCGGGGGAAGCTCAT
TCTTCTCTGAGCAAGCAGGACATGCACAAAGCGTAGAGCAGCCAAAGCAAAAAGGCTTACTCGATGAACTTGGCCGGAAT
TTAACAGATGGCGCAAATTCTGGTTTAATTGATCCAGTCATCGGCCGTGATGAAGAAGTCGCAAGAGTCATTGAAATTTT
AAATAGAAGAAATAAAAATAACCCTGTTCTGATTGGTGAACCAGGTGTTGGGAAAACAGCGATCGCTGAAGGACTCGCAC
TGAAAATTGCAAGTGGCGATGTACCAAATAAATTAAAGAACAAACAAATCTATTTATTAGATGTCTCCTCCCTTGTAGCG
AATACAGGGATACGTGGTCAATTTGAGGAAAGAATGAAGCAGTTAATCAAAGAACTGCAAAGCCGTAAAAATATTATCCT
ATTTGTAGATGAAATCCATCTTCTTGTAGGCGCAGGATCTGCCGAAGGGTCAATGGATGCTGGAAACATCTTAAAACCAG
CCCTTGCACGAGGCGAGCTCCAGCTAGTAGGTGCGACGACATTAAAAGAATATCGTCAAATTGAAAAAGATGCCGCACTT
GAACGACGCTTCCAGCCCGTCATTGTGGATGAGCCAACACAAGATGAAGCGGTCGAGATTTTAAAAGGCATTCAAGATAA
GTACGAAAGTTATCATGGCGTCACTTATTCAGACGAAGCTATTCAAGCGTGTGTTCAATTATCTTCCCGGTATATTCAAG
ACCGTCATTTGCCGGATAAAGCCATTGATTTAATGGATGAAGCAGGTTCAAAAGCGAACCTCTCCATTGATGCAGCAAGT
GAAGATGAACTAACGAATCGTCTGACAGAAATTGCTGCTGAAAAACAAGCTGCTTTAAAAGAAGAACAATACGAAAAAGC
AGCGAAGCTTCGAGATGAAGAAGAAGCCATTGAAGCAAGACTTCAAAACAAAACAAATGACAAAGAACATGTCGTCACAG
CAGAAGCCATTCAAGCCATTGTGGAACAAAAAACAGGCATCCCTGTCGGCAAACTGCAAGCAGACGAACAAACCAAAATG
AAAGAAATGGACGTCCGCTTAAAAGCACGAGTGATCGGTCAGGAACATGCGGTTGAAAAAGTGGCGAAAGCTGTGAAAAG
AAGCAGAGCCGGCTTAAAATCGAAACATAGACCAACAGGCTCCTTCCTATTCGTTGGACCAACAGGTGTCGGGAAAACCG
AATTGTCAAAAACGCTAGCTGAAGAATTATTCGGTTCAAGAGATGCGATCATCCGTTTAGATATGAGTGAGTACATGGAG
AAACACTCAGTATCCAAGCTCATCGGTTCTCCTCCTGGTTATGTTGGACATGATGAAGCGGGTCAGCTGACGGAAAAAGT
GCGCAGAAAACCATACAGCATCATTTTGCTGGATGAAATCGAAAAAGCACATCCTGATGTGCAGCATATGTTCCTTCAAA
TCATGGAAGATGGCCGGTTAACAGACAGCCAAGGCAGAACCGTCAGCTTTAAAGATACGGCCATCATCATGACAAGTAAC
GCAGGCAGCACAGATAAAACGGTCAAAGTCGGCTTCCAGTCTGATCAGGAAGAAGCGATTGAGGAACAATCACTCATTGA
TTCACTCAGCGCCTATTTCAAGCCAGAATTCTTGAACCGTTTTGACAGCATCATTCAGTTTGACTCATTAGATAGAGATG
ATTTAGTGAAGATTGTGGATCTTCTGCTCAATGAGCTGTCAGAGCAATTAAAAGAGCAACATTTAACAGTCCATGTGTCA
AAAGAAGCGAAAGAAAAAATTGCAGAACTTGGATATCACCCTGCATTTGGTGCTCGTCCACTGCGAAGAACCATTCAAGA
GCATGTTGAAGATCAAATGACGGAAATATTGCTTGAAGAAGAAAAGCTTTCAGGATTTACTGTAGATGTTGAAGATAACG
AAATTGTAGTAAAAAAAGGATAA

Domains

Predicted by InterproScan.

• ATPase family associated with various cellular activities (AAA) (AAA) (116-248)

• AAA lid domain (AAA_lid_9) (253-353)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (610-685)

• AAA domain (Cdc48 subfamily) (AAA_2) (437-604)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpC	Lactococcus lactis subsp. cremoris KW2	56.233	100	0.593
clpE	Streptococcus mutans UA159	57.182	100	0.591
clpE	Streptococcus pneumoniae Rx1	55.249	100	0.571
clpE	Streptococcus pneumoniae D39	55.249	100	0.571
clpE	Streptococcus pneumoniae R6	55.249	100	0.571
clpE	Streptococcus pneumoniae TIGR4	55.249	100	0.571
clpC	Bacillus subtilis subsp. subtilis str. 168	53.284	95.714	0.51
clpC	Lactococcus lactis subsp. lactis strain DGCC12653	46.914	92.571	0.434
clpC	Streptococcus thermophilus LMD-9	45.75	92.429	0.423
clpC	Streptococcus thermophilus LMG 18311	45.595	92.429	0.421
clpC	Streptococcus mutans UA159	43.865	93.143	0.409
clpC	Streptococcus pneumoniae TIGR4	45.223	89.714	0.406
clpC	Streptococcus pneumoniae Rx1	45.425	89	0.404
clpC	Streptococcus pneumoniae D39	45.425	89	0.404