Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   ACE6HX_RS04090 Genome accession   NZ_CP170098
Coordinates   856533..857324 (+) Length   263 a.a.
NCBI ID   WP_340875620.1    Uniprot ID   -
Organism   Bacillus pumilus strain X14-67     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 851533..862324
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACE6HX_RS04055 (ACE6HX_04055) - 851615..852163 (+) 549 WP_187704411.1 thioredoxin family protein -
  ACE6HX_RS04060 (ACE6HX_04060) - 852500..852967 (+) 468 WP_034665027.1 thiol-disulfide oxidoreductase DCC family protein -
  ACE6HX_RS04065 (ACE6HX_04065) - 853004..854260 (-) 1257 WP_034665024.1 transcriptional regulator -
  ACE6HX_RS04070 (ACE6HX_04070) - 854534..855121 (+) 588 WP_253294413.1 nitroreductase -
  ACE6HX_RS04075 (ACE6HX_04075) - 855159..855314 (-) 156 WP_034665021.1 YfhD family protein -
  ACE6HX_RS04080 (ACE6HX_04080) - 855376..855489 (-) 114 WP_080869592.1 YfhE family protein -
  ACE6HX_RS04085 (ACE6HX_04085) - 855542..856438 (-) 897 WP_375567108.1 TIGR01777 family oxidoreductase -
  ACE6HX_RS04090 (ACE6HX_04090) recX 856533..857324 (+) 792 WP_340875620.1 recombination regulator RecX Regulator
  ACE6HX_RS04095 (ACE6HX_04095) - 857328..857642 (+) 315 WP_034665012.1 YfhH family protein -
  ACE6HX_RS04100 (ACE6HX_04100) - 857776..857949 (-) 174 WP_003217811.1 YpzG family protein -
  ACE6HX_RS04105 (ACE6HX_04105) - 857975..858124 (-) 150 WP_003217849.1 small, acid-soluble spore protein K -
  ACE6HX_RS04110 (ACE6HX_04110) - 858241..858513 (+) 273 WP_034665009.1 YfhJ family protein -
  ACE6HX_RS04115 (ACE6HX_04115) - 858803..859786 (+) 984 WP_034665005.1 glycosyltransferase family 2 protein -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30588.04 Da        Isoelectric Point: 6.9989

>NTDB_id=1054993 ACE6HX_RS04090 WP_340875620.1 856533..857324(+) (recX) [Bacillus pumilus strain X14-67]
MPYITKISAQKNNTERVNIFLDEKYAFSVDLDVLVQHDLKKGKELDEADIIEIQFGDAVKKGFQQAVDYLSYRMRSVKEV
TDYLTKKEIPAPAISEIIHKLKHYKYVNDLEFAEAYVSTHRKTNSKGPSVLKKELKLKGIDDDNIEQALSQYPDDLQLEE
AVKQVLKLVRKEKNRSAKEIEQRIKLQLQRKGFSFGIIDKALQEAYDGQEEEKEEEALLYMLEKAKRKVGYDGSFEKKMK
VKQFLFRKGFDLDTIDHVLDKGE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=1054993 ACE6HX_RS04090 WP_340875620.1 856533..857324(+) (recX) [Bacillus pumilus strain X14-67]
ATGCCCTATATTACAAAAATCTCCGCTCAGAAAAACAATACAGAGCGGGTGAACATCTTTCTTGATGAAAAGTACGCCTT
TAGCGTTGATCTAGATGTGCTCGTCCAGCACGATTTGAAAAAAGGGAAAGAGCTGGACGAAGCAGATATCATTGAAATTC
AATTCGGTGATGCTGTGAAAAAAGGATTTCAGCAGGCCGTCGATTATTTATCCTACCGAATGAGATCGGTGAAAGAAGTG
ACCGATTATTTGACGAAAAAAGAAATTCCAGCGCCTGCTATTAGTGAAATTATACACAAATTAAAGCATTACAAGTATGT
AAATGATCTTGAATTTGCGGAAGCCTATGTAAGCACCCACCGTAAAACGAACAGCAAAGGGCCGTCCGTCCTGAAAAAAG
AGTTAAAACTCAAAGGGATAGATGATGACAACATTGAACAAGCGCTATCTCAATATCCTGATGACTTACAGCTGGAGGAA
GCTGTGAAGCAGGTTCTCAAGCTTGTGAGAAAAGAAAAGAATCGTTCTGCAAAAGAGATCGAGCAGCGTATCAAGCTGCA
GCTGCAGCGAAAGGGATTTTCGTTTGGGATCATTGATAAAGCCCTTCAAGAAGCCTATGATGGACAAGAAGAGGAAAAGG
AAGAAGAAGCCCTCCTCTATATGCTGGAGAAGGCAAAACGCAAGGTAGGATATGACGGATCATTTGAAAAGAAGATGAAA
GTGAAGCAATTTTTATTCAGAAAAGGCTTTGATCTCGATACAATTGATCACGTTTTAGACAAAGGGGAATGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

63.118

100

0.631

Multiple sequence alignment