Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | R9A04_RS05845 | Genome accession | NZ_AP028402 |
| Coordinates | 1117204..1117506 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain BCH-11531 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1112204..1122506
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R9A04_RS05820 (B11531_11450) | rpsR | 1112567..1112827 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| R9A04_RS05825 (B11531_11460) | lon | 1112887..1115262 (-) | 2376 | WP_317729642.1 | endopeptidase La | - |
| R9A04_RS05830 (B11531_11470) | - | 1115279..1115926 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| R9A04_RS05835 (B11531_11480) | fliW | 1116087..1116476 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| R9A04_RS05840 (B11531_11490) | proC | 1116476..1117207 (+) | 732 | WP_002854026.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| R9A04_RS05845 (B11531_11500) | ctsT | 1117204..1117506 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| R9A04_RS05850 (B11531_11510) | - | 1117503..1118165 (+) | 663 | WP_317729643.1 | hypothetical protein | - |
| R9A04_RS05855 (B11531_11520) | - | 1118162..1118614 (+) | 453 | WP_002869049.1 | hypothetical protein | - |
| R9A04_RS05860 (B11531_11530) | hemD | 1118611..1119240 (-) | 630 | WP_032589886.1 | uroporphyrinogen-III synthase | - |
| R9A04_RS05865 (B11531_11540) | thiE | 1119218..1119850 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| R9A04_RS05870 (B11531_11550) | thiD | 1119840..1120652 (-) | 813 | WP_002873290.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| R9A04_RS05875 (B11531_11560) | - | 1120649..1121335 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| R9A04_RS05880 (B11531_11570) | - | 1121332..1122093 (-) | 762 | WP_052801071.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=105496 R9A04_RS05845 WP_002853046.1 1117204..1117506(+) (ctsT) [Campylobacter jejuni strain BCH-11531]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=105496 R9A04_RS05845 WP_002853046.1 1117204..1117506(+) (ctsT) [Campylobacter jejuni strain BCH-11531]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGTATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGTATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |