Detailed information NTG1054912

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: BCS84_RS02735
• Genome accession: NZ_CP170046
• Coordinates: 577829..578833 (-)
• Length: 334 a.a.
• NCBI ID: WP_010435348.1
• Uniprot ID: A0AAN0LNA0
• Organism: Vibrio cyclitrophicus strain 10N.222.45.E8
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 572829..583833

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BCS84_RS02705 (BCS84_02705)	zapB	572999..573241 (+)	243	WP_010435362.1	cell division protein ZapB	-
BCS84_RS02710 (BCS84_02710)	rraA	573348..573866 (-)	519	WP_010435359.1	ribonuclease E activity regulator RraA	-
BCS84_RS02715 (BCS84_02715)	-	573940..574857 (-)	918	WP_010435357.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
BCS84_RS02720 (BCS84_02720)	hslU	575013..576353 (-)	1341	WP_016767976.1	HslU--HslV peptidase ATPase subunit	-
BCS84_RS02725 (BCS84_02725)	hslV	576412..576960 (-)	549	WP_004729692.1	ATP-dependent protease subunit HslV	-
BCS84_RS02730 (BCS84_02730)	-	577167..577706 (-)	540	WP_010435351.1	SPOR domain-containing protein	-
BCS84_RS02735 (BCS84_02735)	cytR	577829..578833 (-)	1005	WP_010435348.1	DNA-binding transcriptional regulator CytR	Regulator
BCS84_RS02740 (BCS84_02740)	priA	579074..581275 (-)	2202	WP_016767977.1	primosomal protein N'	-
BCS84_RS02745 (BCS84_02745)	rpmE	581606..581824 (+)	219	WP_004737142.1	50S ribosomal protein L31	-
BCS84_RS02750 (BCS84_02750)	-	582156..583445 (+)	1290	WP_016790179.1	malic enzyme-like NAD(P)-binding protein	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 36507.05 Da
• Isoelectric Point: 6.4911

>NTDB_id=1054912 BCS84_RS02735 WP_010435348.1 577829..578833(-) (cytR) [Vibrio cyclitrophicus strain 10N.222.45.E8]
MATMKDVAQLAGVSTATVSRALMNPEKVSVSTRKRVEAAVLEAGYSPNTLARNLRRNESKTIITIVPDICDPYFAEIIRG
IEDAAVENDYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDHPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLAQLGHKRIAQISGPISATLCKFRQQGYQQALRRAGVSMNPAYSTVGDFTFEAGAQAVRQLLALPEQPTA
IFCHNDAMAIGAIQEAKKLGLRVPQDLSIVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLDLLKGNDVQAGSRLLE
AKLVVRGSTAPPRI

Nucleotide

• Length: 1005 bp

>NTDB_id=1054912 BCS84_RS02735 WP_010435348.1 577829..578833(-) (cytR) [Vibrio cyclitrophicus strain 10N.222.45.E8]
ATGGCGACAATGAAGGATGTTGCCCAGCTAGCAGGCGTCTCAACAGCAACGGTATCACGTGCATTGATGAACCCTGAAAA
AGTCTCTGTTTCTACTCGTAAGCGAGTCGAAGCGGCAGTGCTAGAAGCTGGATACTCACCCAACACATTAGCTAGAAACT
TACGTCGCAACGAATCAAAAACCATCATCACTATCGTTCCTGATATCTGTGACCCTTATTTTGCTGAAATCATTCGTGGT
ATCGAAGACGCCGCAGTAGAAAATGATTACCTTGTTCTACTGGGTGATAGCGGCCAGCAAAAGAAGCGCGAGTCTTCTTT
TGTTAACTTGGTTTTCACCAAGCAAGCTGACGGTATGCTGCTGCTTGGCACTGACCATCCGTTTGATGTCAGCAAGCCTG
AACAAAAGAATTTACCGCCGATGGTGATGGCATGTGAATTCGCCCCTGAGCTCGAATTACCGACAGTACACATCGATAAC
TTAACCTCTGCATTTGAAGCGGTTAACTACCTAGCCCAATTAGGTCATAAGCGTATCGCTCAAATATCTGGCCCAATATC
AGCGACACTGTGTAAATTCCGCCAACAAGGCTACCAACAAGCATTGCGCCGTGCGGGTGTATCAATGAACCCAGCTTATA
GCACGGTCGGTGACTTTACCTTTGAAGCTGGTGCTCAAGCGGTTCGTCAACTTCTAGCTCTGCCCGAGCAACCTACTGCT
ATTTTCTGTCATAACGATGCAATGGCGATTGGTGCGATTCAAGAAGCGAAGAAGCTAGGTTTACGCGTCCCTCAAGATTT
ATCAATTGTTGGCTTTGATGACATCCAATTCGCTCAATACTGCGATCCACCACTGACAACAATTTCTCAGCCTCGTTACG
AGATTGGACGTCAAGCCATGCTAATGATGCTTGATCTCCTTAAAGGTAACGATGTTCAAGCTGGTTCACGTCTGCTTGAA
GCTAAACTCGTGGTTCGAGGCAGTACTGCACCACCGCGAATTTAA

Domains

Predicted by InterproScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-329)

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	89.759	99.401	0.892
cytR	Vibrio parahaemolyticus RIMD 2210633	87.688	99.701	0.874