Detailed information NTG1054878

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: BCT18_RS02825
• Genome accession: NZ_CP170034
• Coordinates: 572977..573981 (+)
• Length: 334 a.a.
• NCBI ID: WP_010435348.1
• Uniprot ID: A0AAN0LNA0
• Organism: Vibrio cyclitrophicus strain 10N.222.54.F11
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 567977..578981

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BCT18_RS02810 (BCT18_02810)	-	568364..569653 (-)	1290	WP_016787689.1	malic enzyme-like NAD(P)-binding protein	-
BCT18_RS02815 (BCT18_02815)	rpmE	569985..570203 (-)	219	WP_407834094.1	50S ribosomal protein L31	-
BCT18_RS02820 (BCT18_02820)	priA	570535..572736 (+)	2202	WP_016767977.1	primosomal protein N'	-
BCT18_RS02825 (BCT18_02825)	cytR	572977..573981 (+)	1005	WP_010435348.1	DNA-binding transcriptional regulator CytR	Regulator
BCT18_RS02830 (BCT18_02830)	-	574104..574643 (+)	540	WP_010435351.1	SPOR domain-containing protein	-
BCT18_RS02835 (BCT18_02835)	hslV	574850..575398 (+)	549	WP_004729692.1	ATP-dependent protease subunit HslV	-
BCT18_RS02840 (BCT18_02840)	hslU	575457..576797 (+)	1341	WP_016767976.1	HslU--HslV peptidase ATPase subunit	-
BCT18_RS02845 (BCT18_02845)	-	576953..577870 (+)	918	WP_010435357.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
BCT18_RS02850 (BCT18_02850)	rraA	577944..578462 (+)	519	WP_010435359.1	ribonuclease E activity regulator RraA	-
BCT18_RS02855 (BCT18_02855)	zapB	578569..578811 (-)	243	WP_010435362.1	cell division protein ZapB	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 36507.05 Da
• Isoelectric Point: 6.4911

>NTDB_id=1054878 BCT18_RS02825 WP_010435348.1 572977..573981(+) (cytR) [Vibrio cyclitrophicus strain 10N.222.54.F11]
MATMKDVAQLAGVSTATVSRALMNPEKVSVSTRKRVEAAVLEAGYSPNTLARNLRRNESKTIITIVPDICDPYFAEIIRG
IEDAAVENDYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDHPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLAQLGHKRIAQISGPISATLCKFRQQGYQQALRRAGVSMNPAYSTVGDFTFEAGAQAVRQLLALPEQPTA
IFCHNDAMAIGAIQEAKKLGLRVPQDLSIVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLDLLKGNDVQAGSRLLE
AKLVVRGSTAPPRI

Nucleotide

• Length: 1005 bp

>NTDB_id=1054878 BCT18_RS02825 WP_010435348.1 572977..573981(+) (cytR) [Vibrio cyclitrophicus strain 10N.222.54.F11]
ATGGCGACAATGAAGGATGTTGCCCAGCTAGCAGGCGTCTCAACAGCAACGGTATCACGTGCATTGATGAACCCTGAAAA
AGTCTCTGTTTCTACTCGTAAGCGAGTCGAAGCGGCAGTGCTAGAAGCTGGATACTCACCCAACACATTAGCTAGAAACT
TACGTCGCAACGAATCAAAAACCATCATCACTATCGTTCCTGATATCTGTGACCCTTATTTTGCTGAAATCATTCGTGGT
ATCGAAGACGCCGCAGTAGAAAATGATTACCTTGTTCTACTGGGTGATAGCGGCCAGCAAAAGAAGCGCGAGTCTTCTTT
TGTTAACTTGGTTTTCACCAAGCAAGCTGACGGTATGCTGCTGCTTGGCACTGACCATCCGTTTGATGTCAGCAAGCCTG
AACAAAAGAATTTACCGCCGATGGTGATGGCATGTGAATTCGCCCCTGAGCTCGAATTACCGACAGTACACATCGATAAC
TTAACCTCTGCATTTGAAGCGGTTAACTACCTAGCCCAATTAGGTCATAAGCGTATCGCTCAAATATCTGGCCCAATATC
AGCGACACTGTGTAAATTCCGCCAACAAGGCTACCAACAAGCATTGCGCCGTGCGGGTGTATCAATGAACCCAGCTTATA
GCACGGTCGGTGACTTTACCTTTGAAGCTGGTGCTCAAGCGGTTCGTCAACTTCTAGCTCTGCCCGAGCAACCTACTGCT
ATTTTCTGTCATAACGATGCAATGGCGATTGGTGCGATTCAAGAAGCGAAGAAGCTAGGTTTACGCGTCCCTCAAGATTT
ATCAATTGTTGGCTTTGATGACATCCAATTCGCTCAATACTGCGATCCACCACTGACAACAATTTCTCAGCCTCGTTACG
AGATTGGACGTCAAGCCATGCTAATGATGCTTGATCTCCTTAAAGGTAACGATGTTCAAGCTGGTTCACGTCTGCTTGAA
GCTAAACTCGTGGTTCGAGGCAGTACTGCACCACCGCGAATTTAA

Domains

Predicted by InterproScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-329)

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	89.759	99.401	0.892
cytR	Vibrio parahaemolyticus RIMD 2210633	87.688	99.701	0.874