Detailed information NTG1054837

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: BCT87_RS05660
• Genome accession: NZ_CP170031
• Coordinates: 1288602..1289606 (+)
• Length: 334 a.a.
• NCBI ID: WP_010435348.1
• Uniprot ID: A0AAN0LNA0
• Organism: Vibrio cyclitrophicus strain 10N.261.52.C4
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 1283602..1294606

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BCT87_RS05645 (BCT87_05645)	-	1283989..1285278 (-)	1290	WP_016790179.1	malic enzyme-like NAD(P)-binding protein	-
BCT87_RS05650 (BCT87_05650)	rpmE	1285610..1285828 (-)	219	WP_004737142.1	50S ribosomal protein L31	-
BCT87_RS05655 (BCT87_05655)	priA	1286160..1288361 (+)	2202	WP_010435346.1	primosomal protein N'	-
BCT87_RS05660 (BCT87_05660)	cytR	1288602..1289606 (+)	1005	WP_010435348.1	DNA-binding transcriptional regulator CytR	Regulator
BCT87_RS05665 (BCT87_05665)	-	1289729..1290268 (+)	540	WP_010435351.1	SPOR domain-containing protein	-
BCT87_RS05670 (BCT87_05670)	hslV	1290475..1291023 (+)	549	WP_004729692.1	ATP-dependent protease subunit HslV	-
BCT87_RS05675 (BCT87_05675)	hslU	1291082..1292422 (+)	1341	WP_016767976.1	HslU--HslV peptidase ATPase subunit	-
BCT87_RS05680 (BCT87_05680)	-	1292578..1293495 (+)	918	WP_010435357.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
BCT87_RS05685 (BCT87_05685)	rraA	1293569..1294087 (+)	519	WP_010435359.1	ribonuclease E activity regulator RraA	-
BCT87_RS05690 (BCT87_05690)	zapB	1294194..1294436 (-)	243	WP_010435362.1	cell division protein ZapB	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 36507.05 Da
• Isoelectric Point: 6.4911

>NTDB_id=1054837 BCT87_RS05660 WP_010435348.1 1288602..1289606(+) (cytR) [Vibrio cyclitrophicus strain 10N.261.52.C4]
MATMKDVAQLAGVSTATVSRALMNPEKVSVSTRKRVEAAVLEAGYSPNTLARNLRRNESKTIITIVPDICDPYFAEIIRG
IEDAAVENDYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDHPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLAQLGHKRIAQISGPISATLCKFRQQGYQQALRRAGVSMNPAYSTVGDFTFEAGAQAVRQLLALPEQPTA
IFCHNDAMAIGAIQEAKKLGLRVPQDLSIVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLDLLKGNDVQAGSRLLE
AKLVVRGSTAPPRI

Nucleotide

• Length: 1005 bp

>NTDB_id=1054837 BCT87_RS05660 WP_010435348.1 1288602..1289606(+) (cytR) [Vibrio cyclitrophicus strain 10N.261.52.C4]
ATGGCGACAATGAAGGATGTTGCCCAGCTAGCAGGCGTCTCAACAGCAACGGTATCACGTGCATTGATGAACCCTGAAAA
AGTCTCTGTTTCTACTCGTAAGCGAGTCGAAGCGGCAGTGCTAGAAGCTGGATACTCACCCAACACATTAGCTAGAAACT
TACGTCGCAACGAATCAAAAACCATCATCACTATCGTTCCTGATATCTGTGACCCTTATTTTGCTGAAATCATTCGTGGT
ATCGAAGACGCCGCAGTAGAAAATGATTACCTTGTTCTACTGGGTGATAGCGGCCAGCAAAAGAAGCGCGAGTCTTCTTT
TGTTAACTTGGTTTTCACCAAGCAAGCTGACGGTATGCTGCTGCTTGGCACTGACCATCCGTTTGATGTCAGCAAGCCTG
AACAAAAGAATTTACCGCCGATGGTGATGGCATGTGAATTCGCCCCTGAGCTCGAATTACCGACAGTACACATCGATAAC
TTAACCTCTGCATTTGAAGCGGTTAACTACCTAGCCCAATTAGGTCATAAGCGTATCGCTCAAATATCTGGCCCAATATC
AGCGACACTGTGTAAATTCCGCCAACAAGGCTACCAACAAGCATTGCGCCGTGCGGGTGTATCAATGAACCCAGCTTATA
GCACGGTCGGTGACTTTACCTTTGAAGCTGGTGCTCAAGCGGTTCGTCAACTTCTAGCTCTGCCCGAGCAACCTACTGCT
ATTTTCTGTCATAACGATGCAATGGCGATTGGTGCGATTCAAGAAGCGAAGAAGCTAGGTTTACGCGTCCCTCAAGATTT
ATCAATTGTTGGCTTTGATGACATCCAATTCGCTCAATACTGCGATCCACCACTGACAACAATTTCTCAGCCTCGTTACG
AGATTGGACGTCAAGCCATGCTAATGATGCTTGATCTCCTTAAAGGTAACGATGTTCAAGCTGGTTCACGTCTGCTTGAA
GCTAAACTCGTGGTTCGAGGCAGTACTGCACCACCGCGAATTTAA

Domains

Predicted by InterproScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-329)

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	89.759	99.401	0.892
cytR	Vibrio parahaemolyticus RIMD 2210633	87.688	99.701	0.874