Detailed information
Bioinformatically predicted
Overview
| Name | pilP | Type | Machinery gene |
| Locus tag | BCT87_RS05540 | Genome accession | NZ_CP170031 |
| Coordinates | 1257589..1258107 (-) | Length | 172 a.a. |
| NCBI ID | WP_016767989.1 | Uniprot ID | A0A7Z1S257 |
| Organism | Vibrio cyclitrophicus strain 10N.261.52.C4 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1252589..1263107
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BCT87_RS05525 (BCT87_05525) | aroB | 1254030..1255118 (-) | 1089 | WP_010435273.1 | 3-dehydroquinate synthase | - |
| BCT87_RS05530 (BCT87_05530) | aroK | 1255143..1255661 (-) | 519 | WP_009848907.1 | shikimate kinase AroK | - |
| BCT87_RS05535 (BCT87_05535) | pilQ | 1255838..1257529 (-) | 1692 | WP_010435279.1 | type IV pilus secretin PilQ | Machinery gene |
| BCT87_RS05540 (BCT87_05540) | pilP | 1257589..1258107 (-) | 519 | WP_016767989.1 | pilus assembly protein PilP | Machinery gene |
| BCT87_RS05545 (BCT87_05545) | pilO | 1258094..1258723 (-) | 630 | WP_010435284.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| BCT87_RS05550 (BCT87_05550) | pilN | 1258716..1259330 (-) | 615 | WP_010435288.1 | PilN domain-containing protein | Machinery gene |
| BCT87_RS05555 (BCT87_05555) | pilM | 1259314..1260339 (-) | 1026 | WP_016767986.1 | type IV pilus assembly protein PilM | Machinery gene |
| BCT87_RS05560 (BCT87_05560) | - | 1260491..1263049 (+) | 2559 | WP_010435294.1 | penicillin-binding protein 1A | - |
Sequence
Protein
Download Length: 172 a.a. Molecular weight: 19249.39 Da Isoelectric Point: 10.3202
>NTDB_id=1054833 BCT87_RS05540 WP_016767989.1 1257589..1258107(-) (pilP) [Vibrio cyclitrophicus strain 10N.261.52.C4]
MKPSNTLYSILLLLLLSGCKANEDSLEDFVVQVEVKARKEVEQLVPASEFAAATYQRRAFRPPFELPQEAIVQNQPLVKK
NCWQPSTRARNGKLEKYPLNQLRLKGVMGSDSSVFGLVQTPIGNVVNVKKGQFIGLNNGRVTKVTSQYVLINETLPDGLG
CWHKRNVRLALK
MKPSNTLYSILLLLLLSGCKANEDSLEDFVVQVEVKARKEVEQLVPASEFAAATYQRRAFRPPFELPQEAIVQNQPLVKK
NCWQPSTRARNGKLEKYPLNQLRLKGVMGSDSSVFGLVQTPIGNVVNVKKGQFIGLNNGRVTKVTSQYVLINETLPDGLG
CWHKRNVRLALK
Nucleotide
Download Length: 519 bp
>NTDB_id=1054833 BCT87_RS05540 WP_016767989.1 1257589..1258107(-) (pilP) [Vibrio cyclitrophicus strain 10N.261.52.C4]
ATGAAACCCAGTAACACGCTTTATTCGATCTTGTTATTACTTTTATTGTCGGGCTGCAAAGCAAATGAGGATTCGTTAGA
AGACTTTGTTGTGCAAGTTGAGGTCAAGGCGAGGAAAGAGGTGGAACAGCTTGTTCCTGCCTCTGAGTTTGCTGCTGCCA
CTTATCAACGCCGAGCTTTTCGTCCTCCTTTTGAACTTCCTCAGGAAGCTATTGTGCAGAATCAACCTCTGGTTAAAAAA
AACTGTTGGCAGCCCAGTACTCGTGCTCGTAATGGAAAATTAGAAAAGTACCCGCTAAATCAGTTGCGTTTAAAAGGTGT
AATGGGAAGTGACTCAAGTGTATTTGGCCTTGTGCAGACGCCTATAGGTAACGTTGTGAATGTTAAGAAAGGTCAGTTCA
TCGGCTTAAACAATGGTCGAGTTACCAAGGTAACAAGCCAGTACGTTCTGATTAATGAAACTCTTCCAGATGGCTTAGGT
TGTTGGCACAAGCGCAACGTTAGGCTGGCTCTGAAGTAA
ATGAAACCCAGTAACACGCTTTATTCGATCTTGTTATTACTTTTATTGTCGGGCTGCAAAGCAAATGAGGATTCGTTAGA
AGACTTTGTTGTGCAAGTTGAGGTCAAGGCGAGGAAAGAGGTGGAACAGCTTGTTCCTGCCTCTGAGTTTGCTGCTGCCA
CTTATCAACGCCGAGCTTTTCGTCCTCCTTTTGAACTTCCTCAGGAAGCTATTGTGCAGAATCAACCTCTGGTTAAAAAA
AACTGTTGGCAGCCCAGTACTCGTGCTCGTAATGGAAAATTAGAAAAGTACCCGCTAAATCAGTTGCGTTTAAAAGGTGT
AATGGGAAGTGACTCAAGTGTATTTGGCCTTGTGCAGACGCCTATAGGTAACGTTGTGAATGTTAAGAAAGGTCAGTTCA
TCGGCTTAAACAATGGTCGAGTTACCAAGGTAACAAGCCAGTACGTTCTGATTAATGAAACTCTTCCAGATGGCTTAGGT
TGTTGGCACAAGCGCAACGTTAGGCTGGCTCTGAAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilP | Vibrio cholerae strain A1552 |
63.19 |
94.767 |
0.599 |
| pilP | Vibrio campbellii strain DS40M4 |
55.689 |
97.093 |
0.541 |