Detailed information NTG1054808

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: BCU15_RS14245
• Genome accession: NZ_CP170028
• Coordinates: 3175653..3176657 (+)
• Length: 334 a.a.
• NCBI ID: WP_010435348.1
• Uniprot ID: A0AAN0LNA0
• Organism: Vibrio cyclitrophicus strain 10N.261.55.B9
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3170653..3181657

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BCU15_RS14230 (BCU15_14230)	-	3171040..3172329 (-)	1290	WP_016787689.1	malic enzyme-like NAD(P)-binding protein	-
BCU15_RS14235 (BCU15_14235)	rpmE	3172661..3172879 (-)	219	WP_407834094.1	50S ribosomal protein L31	-
BCU15_RS14240 (BCU15_14240)	priA	3173211..3175412 (+)	2202	WP_016767977.1	primosomal protein N'	-
BCU15_RS14245 (BCU15_14245)	cytR	3175653..3176657 (+)	1005	WP_010435348.1	DNA-binding transcriptional regulator CytR	Regulator
BCU15_RS14250 (BCU15_14250)	-	3176780..3177319 (+)	540	WP_010435351.1	SPOR domain-containing protein	-
BCU15_RS14255 (BCU15_14255)	hslV	3177526..3178074 (+)	549	WP_004729692.1	ATP-dependent protease subunit HslV	-
BCU15_RS14260 (BCU15_14260)	hslU	3178133..3179473 (+)	1341	WP_016767976.1	HslU--HslV peptidase ATPase subunit	-
BCU15_RS14265 (BCU15_14265)	-	3179629..3180546 (+)	918	WP_010435357.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
BCU15_RS14270 (BCU15_14270)	rraA	3180620..3181138 (+)	519	WP_010435359.1	ribonuclease E activity regulator RraA	-
BCU15_RS14275 (BCU15_14275)	zapB	3181245..3181487 (-)	243	WP_010435362.1	cell division protein ZapB	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 36507.05 Da
• Isoelectric Point: 6.4911

>NTDB_id=1054808 BCU15_RS14245 WP_010435348.1 3175653..3176657(+) (cytR) [Vibrio cyclitrophicus strain 10N.261.55.B9]
MATMKDVAQLAGVSTATVSRALMNPEKVSVSTRKRVEAAVLEAGYSPNTLARNLRRNESKTIITIVPDICDPYFAEIIRG
IEDAAVENDYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDHPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLAQLGHKRIAQISGPISATLCKFRQQGYQQALRRAGVSMNPAYSTVGDFTFEAGAQAVRQLLALPEQPTA
IFCHNDAMAIGAIQEAKKLGLRVPQDLSIVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLDLLKGNDVQAGSRLLE
AKLVVRGSTAPPRI

Nucleotide

• Length: 1005 bp

>NTDB_id=1054808 BCU15_RS14245 WP_010435348.1 3175653..3176657(+) (cytR) [Vibrio cyclitrophicus strain 10N.261.55.B9]
ATGGCGACAATGAAGGATGTTGCCCAGCTAGCAGGCGTCTCAACAGCAACGGTATCACGTGCATTGATGAACCCTGAAAA
AGTCTCTGTTTCTACTCGTAAGCGAGTCGAAGCGGCAGTGCTAGAAGCTGGATACTCACCCAACACATTAGCTAGAAACT
TACGTCGCAACGAATCAAAAACCATCATCACTATCGTTCCTGATATCTGTGACCCTTATTTTGCTGAAATCATTCGTGGT
ATCGAAGACGCCGCAGTAGAAAATGATTACCTTGTTCTACTGGGTGATAGCGGCCAGCAAAAGAAGCGCGAGTCTTCTTT
TGTTAACTTGGTTTTCACCAAGCAAGCTGACGGTATGCTGCTGCTTGGCACTGACCATCCGTTTGATGTCAGCAAGCCTG
AACAAAAGAATTTACCGCCGATGGTGATGGCATGTGAATTCGCCCCTGAGCTCGAATTACCGACAGTACACATCGATAAC
TTAACCTCTGCATTTGAAGCGGTTAACTACCTAGCCCAATTAGGTCATAAGCGTATCGCTCAAATATCTGGCCCAATATC
AGCGACACTGTGTAAATTCCGCCAACAAGGCTACCAACAAGCATTGCGCCGTGCGGGTGTATCAATGAACCCAGCTTATA
GCACGGTCGGTGACTTTACCTTTGAAGCTGGTGCTCAAGCGGTTCGTCAACTTCTAGCTCTGCCCGAGCAACCTACTGCT
ATTTTCTGTCATAACGATGCAATGGCGATTGGTGCGATTCAAGAAGCGAAGAAGCTAGGTTTACGCGTCCCTCAAGATTT
ATCAATTGTTGGCTTTGATGACATCCAATTCGCTCAATACTGCGATCCACCACTGACAACAATTTCTCAGCCTCGTTACG
AGATTGGACGTCAAGCCATGCTAATGATGCTTGATCTCCTTAAAGGTAACGATGTTCAAGCTGGTTCACGTCTGCTTGAA
GCTAAACTCGTGGTTCGAGGCAGTACTGCACCACCGCGAATTTAA

Domains

Predicted by InterproScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-329)

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	89.759	99.401	0.892
cytR	Vibrio parahaemolyticus RIMD 2210633	87.688	99.701	0.874