Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | BCU19_RS02995 | Genome accession | NZ_CP170025 |
| Coordinates | 638845..639459 (+) | Length | 204 a.a. |
| NCBI ID | WP_016767987.1 | Uniprot ID | A0A7Z1MKE0 |
| Organism | Vibrio cyclitrophicus strain 10N.261.55.E6 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 633845..644459
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BCU19_RS02980 (BCU19_02980) | oxyR | 634137..635030 (+) | 894 | WP_010435297.1 | DNA-binding transcriptional regulator OxyR | - |
| BCU19_RS02985 (BCU19_02985) | - | 635126..637684 (-) | 2559 | WP_010435294.1 | penicillin-binding protein 1A | - |
| BCU19_RS02990 (BCU19_02990) | pilM | 637836..638861 (+) | 1026 | WP_016767986.1 | type IV pilus assembly protein PilM | Machinery gene |
| BCU19_RS02995 (BCU19_02995) | pilN | 638845..639459 (+) | 615 | WP_016767987.1 | PilN domain-containing protein | Machinery gene |
| BCU19_RS03000 (BCU19_03000) | pilO | 639452..640081 (+) | 630 | WP_010435284.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| BCU19_RS03005 (BCU19_03005) | pilP | 640068..640586 (+) | 519 | WP_016767989.1 | pilus assembly protein PilP | Machinery gene |
| BCU19_RS03010 (BCU19_03010) | pilQ | 640646..642337 (+) | 1692 | WP_016787694.1 | type IV pilus secretin PilQ | Machinery gene |
| BCU19_RS03015 (BCU19_03015) | aroK | 642514..643032 (+) | 519 | WP_009848907.1 | shikimate kinase AroK | - |
| BCU19_RS03020 (BCU19_03020) | aroB | 643057..644145 (+) | 1089 | WP_010435273.1 | 3-dehydroquinate synthase | - |
Sequence
Protein
Download Length: 204 a.a. Molecular weight: 23331.79 Da Isoelectric Point: 9.3072
>NTDB_id=1054730 BCU19_RS02995 WP_016767987.1 638845..639459(+) (pilN) [Vibrio cyclitrophicus strain 10N.261.55.E6]
MLHQINLLSWRDEIRAQHKKRFIHLVILGVIIALAGQWAVGHYFHDQQAKQQARLSYLDKYIGVLDRQIQSLKVAEQEHK
AILTRLAVVESLQFGRNKTTDFMNLMPELIPEGVYVDKIKMNGQEIEMSGISDSTARLATMLDNLERSDSLKEVEMHSIV
HNRKRFNKEFQSFKVSFVFSPVSLENTTAEGTTANIKEKGANHG
MLHQINLLSWRDEIRAQHKKRFIHLVILGVIIALAGQWAVGHYFHDQQAKQQARLSYLDKYIGVLDRQIQSLKVAEQEHK
AILTRLAVVESLQFGRNKTTDFMNLMPELIPEGVYVDKIKMNGQEIEMSGISDSTARLATMLDNLERSDSLKEVEMHSIV
HNRKRFNKEFQSFKVSFVFSPVSLENTTAEGTTANIKEKGANHG
Nucleotide
Download Length: 615 bp
>NTDB_id=1054730 BCU19_RS02995 WP_016767987.1 638845..639459(+) (pilN) [Vibrio cyclitrophicus strain 10N.261.55.E6]
ATGTTGCATCAAATTAACCTGTTGTCGTGGCGTGATGAGATTCGCGCTCAGCATAAAAAGCGTTTCATTCATCTGGTCAT
TCTTGGCGTCATCATTGCGCTTGCCGGGCAATGGGCGGTGGGACACTATTTTCATGACCAACAAGCCAAGCAGCAAGCGC
GCCTCAGTTATCTCGATAAGTACATCGGAGTGCTCGACCGACAAATCCAGTCATTAAAAGTCGCAGAGCAAGAGCACAAA
GCCATCCTTACACGACTTGCTGTCGTGGAGTCTTTACAGTTCGGGCGCAATAAAACCACCGACTTTATGAACCTGATGCC
GGAGCTGATTCCTGAGGGCGTGTATGTCGACAAGATAAAGATGAATGGTCAGGAGATTGAAATGTCGGGCATCAGCGACA
GCACCGCTCGTCTAGCCACCATGTTGGACAACCTAGAACGTTCTGACTCTCTTAAAGAAGTTGAGATGCACTCTATTGTT
CATAACCGTAAGCGCTTCAATAAAGAGTTTCAGAGCTTCAAGGTCTCTTTTGTGTTTAGCCCTGTTTCTTTAGAAAACAC
AACCGCAGAGGGCACAACTGCGAACATAAAAGAGAAGGGGGCGAATCATGGCTAA
ATGTTGCATCAAATTAACCTGTTGTCGTGGCGTGATGAGATTCGCGCTCAGCATAAAAAGCGTTTCATTCATCTGGTCAT
TCTTGGCGTCATCATTGCGCTTGCCGGGCAATGGGCGGTGGGACACTATTTTCATGACCAACAAGCCAAGCAGCAAGCGC
GCCTCAGTTATCTCGATAAGTACATCGGAGTGCTCGACCGACAAATCCAGTCATTAAAAGTCGCAGAGCAAGAGCACAAA
GCCATCCTTACACGACTTGCTGTCGTGGAGTCTTTACAGTTCGGGCGCAATAAAACCACCGACTTTATGAACCTGATGCC
GGAGCTGATTCCTGAGGGCGTGTATGTCGACAAGATAAAGATGAATGGTCAGGAGATTGAAATGTCGGGCATCAGCGACA
GCACCGCTCGTCTAGCCACCATGTTGGACAACCTAGAACGTTCTGACTCTCTTAAAGAAGTTGAGATGCACTCTATTGTT
CATAACCGTAAGCGCTTCAATAAAGAGTTTCAGAGCTTCAAGGTCTCTTTTGTGTTTAGCCCTGTTTCTTTAGAAAACAC
AACCGCAGAGGGCACAACTGCGAACATAAAAGAGAAGGGGGCGAATCATGGCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Vibrio cholerae strain A1552 |
63.731 |
94.608 |
0.603 |
| pilN | Vibrio campbellii strain DS40M4 |
61.78 |
93.627 |
0.578 |