Detailed information NTG1054728

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: BCU19_RS02885
• Genome accession: NZ_CP170025
• Coordinates: 608541..609545 (-)
• Length: 334 a.a.
• NCBI ID: WP_010435348.1
• Uniprot ID: A0AAN0LNA0
• Organism: Vibrio cyclitrophicus strain 10N.261.55.E6
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 603541..614545

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BCU19_RS02855 (BCU19_02855)	zapB	603711..603953 (+)	243	WP_010435362.1	cell division protein ZapB	-
BCU19_RS02860 (BCU19_02860)	rraA	604060..604578 (-)	519	WP_010435359.1	ribonuclease E activity regulator RraA	-
BCU19_RS02865 (BCU19_02865)	-	604652..605569 (-)	918	WP_010435357.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
BCU19_RS02870 (BCU19_02870)	hslU	605725..607065 (-)	1341	WP_016767976.1	HslU--HslV peptidase ATPase subunit	-
BCU19_RS02875 (BCU19_02875)	hslV	607124..607672 (-)	549	WP_004729692.1	ATP-dependent protease subunit HslV	-
BCU19_RS02880 (BCU19_02880)	-	607879..608418 (-)	540	WP_102385438.1	SPOR domain-containing protein	-
BCU19_RS02885 (BCU19_02885)	cytR	608541..609545 (-)	1005	WP_010435348.1	DNA-binding transcriptional regulator CytR	Regulator
BCU19_RS02890 (BCU19_02890)	priA	609786..611987 (-)	2202	WP_016767977.1	primosomal protein N'	-
BCU19_RS02895 (BCU19_02895)	rpmE	612319..612537 (+)	219	WP_004737142.1	50S ribosomal protein L31	-
BCU19_RS02900 (BCU19_02900)	-	612869..614158 (+)	1290	WP_016787689.1	malic enzyme-like NAD(P)-binding protein	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 36507.05 Da
• Isoelectric Point: 6.4911

>NTDB_id=1054728 BCU19_RS02885 WP_010435348.1 608541..609545(-) (cytR) [Vibrio cyclitrophicus strain 10N.261.55.E6]
MATMKDVAQLAGVSTATVSRALMNPEKVSVSTRKRVEAAVLEAGYSPNTLARNLRRNESKTIITIVPDICDPYFAEIIRG
IEDAAVENDYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDHPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLAQLGHKRIAQISGPISATLCKFRQQGYQQALRRAGVSMNPAYSTVGDFTFEAGAQAVRQLLALPEQPTA
IFCHNDAMAIGAIQEAKKLGLRVPQDLSIVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLDLLKGNDVQAGSRLLE
AKLVVRGSTAPPRI

Nucleotide

• Length: 1005 bp

>NTDB_id=1054728 BCU19_RS02885 WP_010435348.1 608541..609545(-) (cytR) [Vibrio cyclitrophicus strain 10N.261.55.E6]
ATGGCGACAATGAAGGATGTTGCCCAGCTAGCAGGCGTCTCAACAGCAACGGTATCACGTGCATTGATGAACCCTGAAAA
AGTCTCTGTTTCTACTCGTAAGCGAGTCGAAGCGGCAGTGCTAGAAGCTGGATACTCACCCAACACATTAGCTAGAAACT
TACGTCGCAACGAATCAAAAACCATCATCACTATCGTTCCTGATATCTGTGACCCTTATTTTGCTGAAATCATTCGTGGT
ATCGAAGACGCCGCAGTAGAAAATGATTACCTTGTTCTACTGGGTGATAGCGGCCAGCAAAAGAAGCGCGAGTCTTCTTT
TGTTAACTTGGTTTTCACCAAGCAAGCTGACGGTATGCTGCTGCTTGGCACTGACCATCCGTTTGATGTCAGCAAGCCTG
AACAAAAGAATTTACCGCCGATGGTGATGGCATGTGAATTCGCCCCTGAGCTCGAATTACCGACAGTACACATCGATAAC
TTAACCTCTGCATTTGAAGCGGTTAACTACCTAGCCCAATTAGGTCATAAGCGTATCGCTCAAATATCTGGCCCAATATC
AGCGACACTGTGTAAATTCCGCCAACAAGGCTACCAACAAGCATTGCGCCGTGCGGGTGTATCAATGAACCCAGCTTATA
GCACGGTCGGTGACTTTACCTTTGAAGCTGGTGCTCAAGCGGTTCGTCAACTTCTAGCTCTGCCCGAGCAACCTACTGCT
ATTTTCTGTCATAACGATGCAATGGCGATTGGTGCGATTCAAGAAGCGAAGAAGCTAGGTTTACGCGTCCCTCAAGATTT
ATCAATTGTTGGCTTTGATGACATCCAATTCGCTCAATACTGCGATCCACCACTGACAACAATTTCTCAGCCTCGTTACG
AGATTGGACGTCAAGCCATGCTAATGATGCTTGATCTCCTTAAAGGTAACGATGTTCAAGCTGGTTCACGTCTGCTTGAA
GCTAAACTCGTGGTTCGAGGCAGTACTGCACCACCGCGAATTTAA

Domains

Predicted by InterproScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-329)

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	89.759	99.401	0.892
cytR	Vibrio parahaemolyticus RIMD 2210633	87.688	99.701	0.874