Detailed information NTG1054716

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: BCU28_RS15640
• Genome accession: NZ_CP170022
• Coordinates: 3453443..3454447 (+)
• Length: 334 a.a.
• NCBI ID: WP_010435348.1
• Uniprot ID: A0AAN0LNA0
• Organism: Vibrio cyclitrophicus strain 10N.286.45.B7
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3448443..3459447

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BCU28_RS15625 (BCU28_15625)	-	3448830..3450119 (-)	1290	WP_016790179.1	malic enzyme-like NAD(P)-binding protein	-
BCU28_RS15630 (BCU28_15630)	rpmE	3450451..3450669 (-)	219	WP_407834094.1	50S ribosomal protein L31	-
BCU28_RS15635 (BCU28_15635)	priA	3451001..3453202 (+)	2202	WP_010435346.1	primosomal protein N'	-
BCU28_RS15640 (BCU28_15640)	cytR	3453443..3454447 (+)	1005	WP_010435348.1	DNA-binding transcriptional regulator CytR	Regulator
BCU28_RS15645 (BCU28_15645)	-	3454570..3455109 (+)	540	WP_010435351.1	SPOR domain-containing protein	-
BCU28_RS15650 (BCU28_15650)	hslV	3455316..3455864 (+)	549	WP_004729692.1	ATP-dependent protease subunit HslV	-
BCU28_RS15655 (BCU28_15655)	hslU	3455923..3457263 (+)	1341	WP_016767976.1	HslU--HslV peptidase ATPase subunit	-
BCU28_RS15660 (BCU28_15660)	-	3457419..3458336 (+)	918	WP_010435357.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
BCU28_RS15665 (BCU28_15665)	rraA	3458410..3458928 (+)	519	WP_010435359.1	ribonuclease E activity regulator RraA	-
BCU28_RS15670 (BCU28_15670)	zapB	3459035..3459277 (-)	243	WP_010435362.1	cell division protein ZapB	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 36507.05 Da
• Isoelectric Point: 6.4911

>NTDB_id=1054716 BCU28_RS15640 WP_010435348.1 3453443..3454447(+) (cytR) [Vibrio cyclitrophicus strain 10N.286.45.B7]
MATMKDVAQLAGVSTATVSRALMNPEKVSVSTRKRVEAAVLEAGYSPNTLARNLRRNESKTIITIVPDICDPYFAEIIRG
IEDAAVENDYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDHPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLAQLGHKRIAQISGPISATLCKFRQQGYQQALRRAGVSMNPAYSTVGDFTFEAGAQAVRQLLALPEQPTA
IFCHNDAMAIGAIQEAKKLGLRVPQDLSIVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLDLLKGNDVQAGSRLLE
AKLVVRGSTAPPRI

Nucleotide

• Length: 1005 bp

>NTDB_id=1054716 BCU28_RS15640 WP_010435348.1 3453443..3454447(+) (cytR) [Vibrio cyclitrophicus strain 10N.286.45.B7]
ATGGCGACAATGAAGGATGTTGCCCAGCTAGCAGGCGTCTCAACAGCAACGGTATCACGTGCATTGATGAACCCTGAAAA
AGTCTCTGTTTCTACTCGTAAGCGAGTCGAAGCGGCAGTGCTAGAAGCTGGATACTCACCCAACACATTAGCTAGAAACT
TACGTCGCAACGAATCAAAAACCATCATCACTATCGTTCCTGATATCTGTGACCCTTATTTTGCTGAAATCATTCGTGGT
ATCGAAGACGCCGCAGTAGAAAATGATTACCTTGTTCTACTGGGTGATAGCGGCCAGCAAAAGAAGCGCGAGTCTTCTTT
TGTTAACTTGGTTTTCACCAAGCAAGCTGACGGTATGCTGCTGCTTGGCACTGACCATCCGTTTGATGTCAGCAAGCCTG
AACAAAAGAATTTACCGCCGATGGTGATGGCATGTGAATTCGCCCCTGAGCTCGAATTACCGACAGTACACATCGATAAC
TTAACCTCTGCATTTGAAGCGGTTAACTACCTAGCCCAATTAGGTCATAAGCGTATCGCTCAAATATCTGGCCCAATATC
AGCGACACTGTGTAAATTCCGCCAACAAGGCTACCAACAAGCATTGCGCCGTGCGGGTGTATCAATGAACCCAGCTTATA
GCACGGTCGGTGACTTTACCTTTGAAGCTGGTGCTCAAGCGGTTCGTCAACTTCTAGCTCTGCCCGAGCAACCTACTGCT
ATTTTCTGTCATAACGATGCAATGGCGATTGGTGCGATTCAAGAAGCGAAGAAGCTAGGTTTACGCGTCCCTCAAGATTT
ATCAATTGTTGGCTTTGATGACATCCAATTCGCTCAATACTGCGATCCACCACTGACAACAATTTCTCAGCCTCGTTACG
AGATTGGACGTCAAGCCATGCTAATGATGCTTGATCTCCTTAAAGGTAACGATGTTCAAGCTGGTTCACGTCTGCTTGAA
GCTAAACTCGTGGTTCGAGGCAGTACTGCACCACCGCGAATTTAA

Domains

Predicted by InterproScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-329)

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	89.759	99.401	0.892
cytR	Vibrio parahaemolyticus RIMD 2210633	87.688	99.701	0.874