Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   ACNUDV_RS11505 Genome accession   NZ_OZ197092
Coordinates   2344300..2345145 (+) Length   281 a.a.
NCBI ID   WP_001825659.1    Uniprot ID   -
Organism   Staphylococcus aureus isolate 23S00050-1     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2339300..2350145
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACNUDV_RS11490 - 2339567..2341408 (-) 1842 WP_000077324.1 bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase -
  ACNUDV_RS11495 metC 2341377..2342537 (-) 1161 WP_000175863.1 cystathionine beta-lyase MetC -
  ACNUDV_RS11500 - 2342534..2343637 (-) 1104 WP_000655690.1 PLP-dependent transferase -
  ACNUDV_RS11505 spo0J 2344300..2345145 (+) 846 WP_001825659.1 ParB/RepB/Spo0J family partition protein Regulator
  ACNUDV_RS11510 - 2345299..2346180 (+) 882 WP_000373073.1 mechanosensitive ion channel family protein -
  ACNUDV_RS11515 - 2346210..2346413 (+) 204 WP_000157348.1 DUF951 domain-containing protein -
  ACNUDV_RS11520 ychF 2346425..2347522 (+) 1098 WP_001218731.1 redox-regulated ATPase YchF -
  ACNUDV_RS11525 - 2347608..2347799 (-) 192 WP_001052481.1 hypothetical protein -
  ACNUDV_RS11530 rpsF 2348043..2348339 (+) 297 WP_001261460.1 30S ribosomal protein S6 -
  ACNUDV_RS11535 ssbA 2348360..2348863 (+) 504 WP_000934799.1 single-stranded DNA-binding protein Machinery gene
  ACNUDV_RS11540 rpsR 2348915..2349157 (+) 243 WP_000897044.1 30S ribosomal protein S18 -
  ACNUDV_RS11545 - 2349394..2349621 (-) 228 Protein_2248 Abi family protein -
  ACNUDV_RS11550 - 2349614..2349890 (-) 277 Protein_2249 site-specific integrase -

Sequence

Protein


Download         Length: 281 a.a.        Molecular weight: 32797.86 Da        Isoelectric Point: 10.0554

>NTDB_id=1054686 ACNUDV_RS11505 WP_001825659.1 2344300..2345145(+) (spo0J) [Staphylococcus aureus isolate 23S00050-1]
MSELSKSEDQRITKTKDEQIKKIDISDIKPNPYQPRKTFDENHLNDLADSIKQYGILQPIVLRKTVQGYYIVVGERRFRA
SKIAGLKYVSAIIKDLTDEDMMELAVIENLQREDLNAIEEAESYQRLMTDLKITQQEVAKRLSKSRPYIANMLRLLHLPK
KIADMVKDGRLTSAHGRTLLAIKDEQQMLRLAKRVVKEKWSVRYLENHVNELKNVSSKSETDKVDITKPKFIKQQERQLR
EQYGAKVDISIKKSVGKISFEFESQDDFVRIIEQLNRKYGK

Nucleotide


Download         Length: 846 bp        

>NTDB_id=1054686 ACNUDV_RS11505 WP_001825659.1 2344300..2345145(+) (spo0J) [Staphylococcus aureus isolate 23S00050-1]
GTGAGTGAATTGTCAAAAAGTGAAGATCAACGTATTACTAAAACAAAAGATGAACAAATTAAGAAAATAGATATATCGGA
TATCAAACCGAATCCGTATCAGCCCCGAAAAACTTTCGATGAAAATCATTTAAATGATTTGGCAGATTCAATTAAGCAAT
ATGGTATTTTGCAACCAATTGTGCTAAGAAAAACAGTTCAAGGTTATTACATTGTAGTTGGTGAAAGAAGGTTTAGAGCT
TCGAAAATTGCTGGTCTAAAATACGTATCAGCGATTATCAAAGATTTAACAGATGAAGATATGATGGAACTGGCGGTCAT
CGAAAATTTACAACGAGAAGACTTAAATGCGATTGAAGAAGCTGAAAGTTATCAACGTTTGATGACAGATTTGAAAATTA
CACAACAAGAAGTAGCGAAGCGATTGAGTAAGTCGCGCCCGTATATAGCGAATATGTTGAGGTTATTACATTTACCGAAA
AAGATTGCTGACATGGTAAAAGATGGGCGACTGACAAGTGCACATGGACGAACGTTATTGGCAATTAAAGATGAACAACA
AATGCTTAGGTTAGCGAAACGGGTTGTTAAAGAAAAGTGGAGTGTTAGATATTTAGAAAACCATGTTAATGAATTAAAAA
ATGTTTCGTCAAAGTCGGAAACAGACAAGGTAGATATAACTAAGCCTAAATTTATAAAGCAACAAGAACGACAGTTGCGA
GAACAGTATGGCGCAAAAGTAGATATATCGATAAAAAAATCAGTCGGCAAAATCTCATTTGAGTTTGAATCACAAGATGA
CTTTGTGAGAATCATTGAACAATTAAATCGTAAGTATGGTAAATAG

Domains

Predicted by InterProScan.

ParB/Sulfiredoxin domain (ParB_N)

(22-109)

HTH domain found in ParB protein (HTH_ParB)

(161-210)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

40.996

92.883

0.381