Detailed information NTG1054656

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: BCU67_RS04550
• Genome accession: NZ_CP170019
• Coordinates: 923691..927080 (-)
• Length: 1129 a.a.
• NCBI ID: WP_016787808.1
• Uniprot ID: A0AAN0LMV1
• Organism: Vibrio cyclitrophicus strain 10N.286.49.B11
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 918691..932080

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BCU67_RS04535 (BCU67_04535)	-	919116..920141 (-)	1026	WP_009847563.1	ABC transporter permease	-
BCU67_RS04540 (BCU67_04540)	-	920144..921130 (-)	987	WP_010436046.1	ABC transporter permease	-
BCU67_RS04545 (BCU67_04545)	-	921300..922982 (-)	1683	WP_016768984.1	ABC transporter substrate-binding protein	-
BCU67_RS04550 (BCU67_04550)	chiS	923691..927080 (-)	3390	WP_016787808.1	response regulator	Regulator
BCU67_RS04555 (BCU67_04555)	rsmC	927297..928319 (-)	1023	WP_016792053.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
BCU67_RS04560 (BCU67_04560)	-	928430..929515 (-)	1086	WP_009847558.1	AI-2E family transporter	-
BCU67_RS04565 (BCU67_04565)	-	929592..929717 (+)	126	WP_009847557.1	hypothetical protein	-
BCU67_RS04570 (BCU67_04570)	hemL	929858..931153 (-)	1296	WP_010436060.1	glutamate-1-semialdehyde 2,1-aminomutase	-
BCU67_RS04575 (BCU67_04575)	erpA	931450..931791 (+)	342	WP_004734539.1	iron-sulfur cluster insertion protein ErpA	-

Sequence

Protein

• Length: 1129 a.a.
• Molecular weight: 127261.90 Da
• Isoelectric Point: 5.3683

>NTDB_id=1054656 BCU67_RS04550 WP_016787808.1 923691..927080(-) (chiS) [Vibrio cyclitrophicus strain 10N.286.49.B11]
MFRFYRKQKFKRLQNTLMLAFLVLSITPVTLIAIFFLQSHSQDLQEQSTSHLVSVRDTKQQQIVDYLQAQESQVMGFVRS
ELANASGGRFYGLINAFQRLGLDIDEARSNAQQRYIQGSGDQIKTSILPESSSFIGSERYRLLHKRYHNAYLELLKRSDF
DDILLVDINGNVAYSVFKNDDYGTNLLTGKYKDSNLGVTFQRLAKDVKDKRKSNEDYTPVIVSDFKDEDGKQTAWLGAPI
VQQGYLHSYAMFRLPINGITKLIADLNKRSNIQTLLVGDDHLPRSLAHSQESINLSLDVVDKALAGETAVGTFDNTQDQA
IIAAYTPIDLKYATWALVVELPEKEAFARIHQLEKIFVIVMLTAIILVFVASHYLSNFITSPLLKLTWAAEKVSAGDLDE
TMINTERKDEIGRLAVSFERMQRSIRDKMQLIKSQNDELEDNLKTIQKQNEELQLANKLKDEFLATTSHELRTPLHGMVG
IAEALISGANGPIPASQKYQLDIIINSGQRLATLVDDLLDYHKMRYGSLDIKKSAVDLSAATSLVLELSHHLLGNKPIRI
INQVPSDLGLVSSDPQRLEQVMYNLVGNAIKYTSEGKIVISASVIDDNIRVQVVDTGQGIPAEYLEHIFEPLIQAGQDSS
NYRQGAGLGLSISRQLIELMGGSLYVSSQPMLGTTFSFTLPLATQQELDSYNESGSYSHFQAPDLIDNSQQENSVINEDP
NGPLLVIADDEPVNLRVLDSFLKLEGYRVRTACDGPETIELIEKEKPELLLLDIMMPGMSGYQVCEALRKRYDHAQLPII
MLTALNQAEDRVRGFEAGANDYLSKPFNKQELAARITAHLSASKAEQRRLENDQLQLELKHRAMVEANLLETQGRLLEQL
ESAPEAIICIRDDQRIRFANEAAAKLFRRGQEQLKRSMADEIIAPKYLKVEQAHYCGDIDIYIDDTRQRIPSDILKLPEG
SGLDTMYIFNVGGGVNSNRVNNLETAVEALSSYAFEGDKDKLQQLKELGGEFTRLADKASGEGKNKQELMREVLVDVMTN
AIIYWESVTGETKFAFAEKSGLWRVYLDRSTLQTRTLDKYLRVETLPKTPRWRTVLSSIEFILEHCKEQTPERTHIEMLR
DKLQKLLTS

Nucleotide

• Length: 3390 bp

>NTDB_id=1054656 BCU67_RS04550 WP_016787808.1 923691..927080(-) (chiS) [Vibrio cyclitrophicus strain 10N.286.49.B11]
ATGTTTAGATTCTATCGTAAGCAGAAGTTTAAGCGCCTTCAAAATACCCTAATGTTGGCATTTCTTGTCCTCAGTATTAC
ACCAGTGACACTTATCGCGATATTTTTCCTCCAATCGCACAGTCAGGATCTTCAGGAACAAAGCACCTCACACCTTGTTT
CGGTTCGTGATACTAAGCAGCAGCAAATTGTCGATTACCTGCAAGCTCAAGAATCCCAAGTCATGGGCTTTGTTCGCTCA
GAATTGGCCAATGCCAGTGGCGGACGCTTTTATGGTTTGATTAACGCCTTCCAGCGTCTCGGTTTAGATATTGACGAGGC
ACGTAGCAATGCTCAGCAACGCTACATCCAAGGCTCCGGCGATCAAATTAAAACATCGATTCTTCCAGAATCCAGCAGCT
TTATAGGCAGTGAACGTTATCGTCTGCTGCACAAGCGCTACCATAACGCTTACCTAGAGCTGCTTAAACGCTCCGATTTT
GACGATATCTTATTGGTTGATATTAACGGCAATGTGGCTTATTCGGTGTTTAAAAATGACGATTACGGCACCAATTTGCT
GACTGGAAAATACAAAGATTCAAATCTCGGTGTTACCTTTCAACGCTTAGCAAAAGACGTAAAAGACAAACGTAAATCCA
ACGAAGATTACACGCCCGTTATTGTTTCCGACTTTAAAGACGAAGACGGAAAACAAACCGCATGGTTAGGTGCGCCTATC
GTACAACAGGGCTATCTACACAGTTATGCGATGTTTAGACTACCGATTAACGGCATTACTAAGCTGATCGCCGATTTAAA
TAAGCGCTCAAATATTCAAACCCTTTTGGTTGGTGACGATCACTTGCCTCGCAGCCTTGCGCACTCACAAGAGTCGATTA
ATTTGAGTTTGGATGTTGTCGATAAGGCACTTGCCGGTGAAACAGCCGTTGGGACGTTTGATAACACTCAAGATCAAGCG
ATCATCGCAGCCTACACTCCTATTGATCTTAAATACGCAACATGGGCTTTGGTCGTGGAACTTCCAGAAAAAGAAGCCTT
TGCTCGTATTCATCAGCTAGAAAAGATCTTCGTGATCGTTATGCTAACAGCGATCATTCTTGTATTTGTCGCATCGCATT
ATCTGTCTAATTTTATCACTTCCCCACTACTTAAACTGACGTGGGCTGCCGAGAAAGTCTCGGCGGGAGATCTTGATGAA
ACCATGATCAATACCGAACGCAAAGATGAAATAGGTCGCTTGGCGGTGAGTTTCGAAAGAATGCAGCGATCGATTCGTGA
CAAAATGCAGCTGATCAAGAGCCAAAACGATGAACTAGAGGACAACCTTAAGACCATTCAAAAGCAAAACGAAGAGTTGC
AACTGGCCAATAAACTGAAAGATGAGTTCTTAGCCACCACCTCACATGAATTGAGAACGCCATTGCATGGCATGGTTGGT
ATTGCTGAAGCGCTGATATCTGGTGCCAACGGCCCTATTCCTGCCAGCCAGAAATACCAACTGGATATCATCATCAATAG
TGGTCAGAGATTGGCAACATTGGTTGATGATCTTCTCGATTATCACAAAATGCGTTATGGCAGCTTGGACATTAAAAAGT
CAGCGGTTGACCTGTCGGCTGCCACCAGCTTGGTACTTGAGTTATCTCATCACCTGTTAGGTAACAAACCAATCCGTATC
ATTAACCAAGTGCCGAGTGATTTAGGGCTCGTTTCATCCGATCCTCAACGACTTGAGCAAGTCATGTATAACTTGGTTGG
CAATGCTATCAAGTACACATCCGAAGGCAAGATTGTTATCTCAGCAAGCGTTATCGACGACAACATTCGTGTACAAGTTG
TCGATACAGGTCAAGGTATCCCAGCAGAATACCTTGAACACATCTTTGAACCACTGATTCAAGCAGGCCAAGATTCAAGT
AACTATCGCCAAGGTGCAGGGCTTGGGTTATCCATTAGCCGTCAGCTCATTGAACTAATGGGCGGCTCGTTGTACGTGAG
TAGTCAACCAATGCTTGGGACAACCTTCAGCTTCACATTACCTCTAGCTACCCAACAAGAATTGGATAGTTACAATGAAT
CAGGGAGCTACTCACACTTCCAAGCCCCAGATTTAATTGATAACTCTCAGCAAGAAAACAGTGTTATCAACGAAGACCCT
AATGGTCCGTTGTTAGTGATTGCTGACGATGAGCCAGTCAACCTGCGCGTGCTAGACAGCTTCTTAAAATTGGAAGGTTA
CCGAGTTCGTACCGCATGTGACGGCCCTGAAACCATTGAACTGATTGAGAAAGAGAAACCAGAGCTACTTCTGCTCGATA
TCATGATGCCAGGTATGAGCGGCTATCAGGTTTGTGAAGCACTTCGTAAGCGATACGATCATGCACAGTTACCAATCATC
ATGCTAACGGCACTCAACCAAGCAGAAGACCGTGTTCGAGGTTTCGAAGCAGGTGCCAATGACTATTTATCTAAACCGTT
CAACAAACAAGAACTGGCCGCTCGAATTACAGCGCATCTATCAGCAAGTAAAGCCGAACAGAGACGCCTTGAAAACGACC
AACTGCAACTGGAACTCAAGCATAGAGCTATGGTTGAAGCTAACCTGTTGGAAACTCAAGGTCGACTGCTAGAACAACTA
GAATCAGCCCCTGAAGCCATTATATGTATTCGTGATGACCAACGTATTCGCTTCGCCAACGAAGCGGCAGCGAAACTATT
TAGACGTGGGCAAGAACAACTCAAGCGTTCAATGGCCGACGAGATAATCGCGCCTAAATATCTTAAAGTGGAACAAGCCC
ATTACTGTGGTGATATTGATATCTACATAGATGACACACGTCAGCGCATACCAAGTGATATCCTTAAGCTACCTGAAGGC
TCAGGGCTCGACACAATGTATATCTTTAATGTGGGTGGTGGTGTTAACTCAAACCGAGTTAATAATCTTGAAACCGCGGT
TGAAGCACTTTCAAGCTACGCCTTTGAAGGTGACAAAGATAAACTACAACAGCTCAAGGAACTTGGCGGTGAGTTTACTC
GCCTTGCTGATAAAGCGAGCGGTGAAGGTAAAAACAAACAAGAACTGATGCGTGAAGTACTAGTCGATGTCATGACTAAT
GCCATCATCTACTGGGAGTCTGTTACTGGTGAAACCAAGTTTGCCTTCGCAGAGAAAAGTGGGTTGTGGCGCGTCTATTT
AGACCGCAGCACCCTGCAAACTCGAACGCTAGACAAATACCTACGCGTCGAAACCCTACCGAAAACGCCTCGCTGGCGAA
CGGTACTAAGCTCAATCGAATTCATACTTGAGCACTGTAAAGAACAAACACCAGAAAGAACTCATATTGAGATGCTAAGG
GATAAACTACAGAAACTACTGACTAGTTAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-683)

• HAMP domain (HAMP) (375-427)

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

• PAS domain (PAS_8) (880-914)

• Response regulator receiver domain (Response_reg) (726-836)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	76.262	100	0.763