Detailed information NTG1054637

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: BCU67_RS02850
• Genome accession: NZ_CP170019
• Coordinates: 592482..593486 (-)
• Length: 334 a.a.
• NCBI ID: WP_010435348.1
• Uniprot ID: A0AAN0LNA0
• Organism: Vibrio cyclitrophicus strain 10N.286.49.B11
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 587482..598486

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BCU67_RS02820 (BCU67_02820)	zapB	587652..587894 (+)	243	WP_010435362.1	cell division protein ZapB	-
BCU67_RS02825 (BCU67_02825)	rraA	588001..588519 (-)	519	WP_010435359.1	ribonuclease E activity regulator RraA	-
BCU67_RS02830 (BCU67_02830)	-	588593..589510 (-)	918	WP_010435357.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
BCU67_RS02835 (BCU67_02835)	hslU	589666..591006 (-)	1341	WP_016767976.1	HslU--HslV peptidase ATPase subunit	-
BCU67_RS02840 (BCU67_02840)	hslV	591065..591613 (-)	549	WP_004729692.1	ATP-dependent protease subunit HslV	-
BCU67_RS02845 (BCU67_02845)	-	591820..592359 (-)	540	WP_010435351.1	SPOR domain-containing protein	-
BCU67_RS02850 (BCU67_02850)	cytR	592482..593486 (-)	1005	WP_010435348.1	DNA-binding transcriptional regulator CytR	Regulator
BCU67_RS02855 (BCU67_02855)	priA	593727..595928 (-)	2202	WP_016767977.1	primosomal protein N'	-
BCU67_RS02860 (BCU67_02860)	rpmE	596260..596478 (+)	219	WP_407834094.1	50S ribosomal protein L31	-
BCU67_RS02865 (BCU67_02865)	-	596810..598099 (+)	1290	WP_016787689.1	malic enzyme-like NAD(P)-binding protein	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 36507.05 Da
• Isoelectric Point: 6.4911

>NTDB_id=1054637 BCU67_RS02850 WP_010435348.1 592482..593486(-) (cytR) [Vibrio cyclitrophicus strain 10N.286.49.B11]
MATMKDVAQLAGVSTATVSRALMNPEKVSVSTRKRVEAAVLEAGYSPNTLARNLRRNESKTIITIVPDICDPYFAEIIRG
IEDAAVENDYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDHPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLAQLGHKRIAQISGPISATLCKFRQQGYQQALRRAGVSMNPAYSTVGDFTFEAGAQAVRQLLALPEQPTA
IFCHNDAMAIGAIQEAKKLGLRVPQDLSIVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLDLLKGNDVQAGSRLLE
AKLVVRGSTAPPRI

Nucleotide

• Length: 1005 bp

>NTDB_id=1054637 BCU67_RS02850 WP_010435348.1 592482..593486(-) (cytR) [Vibrio cyclitrophicus strain 10N.286.49.B11]
ATGGCGACAATGAAGGATGTTGCCCAGCTAGCAGGCGTCTCAACAGCAACGGTATCACGTGCATTGATGAACCCTGAAAA
AGTCTCTGTTTCTACTCGTAAGCGAGTCGAAGCGGCAGTGCTAGAAGCTGGATACTCACCCAACACATTAGCTAGAAACT
TACGTCGCAACGAATCAAAAACCATCATCACTATCGTTCCTGATATCTGTGACCCTTATTTTGCTGAAATCATTCGTGGT
ATCGAAGACGCCGCAGTAGAAAATGATTACCTTGTTCTACTGGGTGATAGCGGCCAGCAAAAGAAGCGCGAGTCTTCTTT
TGTTAACTTGGTTTTCACCAAGCAAGCTGACGGTATGCTGCTGCTTGGCACTGACCATCCGTTTGATGTCAGCAAGCCTG
AACAAAAGAATTTACCGCCGATGGTGATGGCATGTGAATTCGCCCCTGAGCTCGAATTACCGACAGTACACATCGATAAC
TTAACCTCTGCATTTGAAGCGGTTAACTACCTAGCCCAATTAGGTCATAAGCGTATCGCTCAAATATCTGGCCCAATATC
AGCGACACTGTGTAAATTCCGCCAACAAGGCTACCAACAAGCATTGCGCCGTGCGGGTGTATCAATGAACCCAGCTTATA
GCACGGTCGGTGACTTTACCTTTGAAGCTGGTGCTCAAGCGGTTCGTCAACTTCTAGCTCTGCCCGAGCAACCTACTGCT
ATTTTCTGTCATAACGATGCAATGGCGATTGGTGCGATTCAAGAAGCGAAGAAGCTAGGTTTACGCGTCCCTCAAGATTT
ATCAATTGTTGGCTTTGATGACATCCAATTCGCTCAATACTGCGATCCACCACTGACAACAATTTCTCAGCCTCGTTACG
AGATTGGACGTCAAGCCATGCTAATGATGCTTGATCTCCTTAAAGGTAACGATGTTCAAGCTGGTTCACGTCTGCTTGAA
GCTAAACTCGTGGTTCGAGGCAGTACTGCACCACCGCGAATTTAA

Domains

Predicted by InterproScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-329)

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	89.759	99.401	0.892
cytR	Vibrio parahaemolyticus RIMD 2210633	87.688	99.701	0.874