Detailed information
Bioinformatically predicted
Overview
| Name | pilP | Type | Machinery gene |
| Locus tag | BCU92_RS09680 | Genome accession | NZ_CP170017 |
| Coordinates | 2123705..2124223 (+) | Length | 172 a.a. |
| NCBI ID | WP_016787693.1 | Uniprot ID | A0AAN0LPQ8 |
| Organism | Vibrio cyclitrophicus strain 10N.286.52.C10 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2118705..2129223
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BCU92_RS09660 (BCU92_09660) | - | 2118763..2121321 (-) | 2559 | WP_010435294.1 | penicillin-binding protein 1A | - |
| BCU92_RS09665 (BCU92_09665) | pilM | 2121473..2122498 (+) | 1026 | WP_016787692.1 | type IV pilus assembly protein PilM | Machinery gene |
| BCU92_RS09670 (BCU92_09670) | pilN | 2122482..2123096 (+) | 615 | WP_010435288.1 | PilN domain-containing protein | Machinery gene |
| BCU92_RS09675 (BCU92_09675) | pilO | 2123089..2123718 (+) | 630 | WP_010435284.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| BCU92_RS09680 (BCU92_09680) | pilP | 2123705..2124223 (+) | 519 | WP_016787693.1 | pilus assembly protein PilP | Machinery gene |
| BCU92_RS09685 (BCU92_09685) | pilQ | 2124283..2125974 (+) | 1692 | WP_016787694.1 | type IV pilus secretin PilQ | Machinery gene |
| BCU92_RS09690 (BCU92_09690) | aroK | 2126151..2126669 (+) | 519 | WP_009848907.1 | shikimate kinase AroK | - |
| BCU92_RS09695 (BCU92_09695) | aroB | 2126694..2127782 (+) | 1089 | WP_010435273.1 | 3-dehydroquinate synthase | - |
Sequence
Protein
Download Length: 172 a.a. Molecular weight: 19191.31 Da Isoelectric Point: 10.3202
>NTDB_id=1054605 BCU92_RS09680 WP_016787693.1 2123705..2124223(+) (pilP) [Vibrio cyclitrophicus strain 10N.286.52.C10]
MKPSNALYSILLLLLLSGCKANEDSLEDFVVQVEAKARKEVEQLVPASEFAAATYQRRAFRPPFELPQEAIVQNQPLVKK
NCWQPSTRARNGKLEKYPLNQLRLKGVMGSDSSVFGLVQTPIGNVVNVKKGQFIGLNNGRVTKVTSQYVLINETLPDGLG
CWHKRNVRLALK
MKPSNALYSILLLLLLSGCKANEDSLEDFVVQVEAKARKEVEQLVPASEFAAATYQRRAFRPPFELPQEAIVQNQPLVKK
NCWQPSTRARNGKLEKYPLNQLRLKGVMGSDSSVFGLVQTPIGNVVNVKKGQFIGLNNGRVTKVTSQYVLINETLPDGLG
CWHKRNVRLALK
Nucleotide
Download Length: 519 bp
>NTDB_id=1054605 BCU92_RS09680 WP_016787693.1 2123705..2124223(+) (pilP) [Vibrio cyclitrophicus strain 10N.286.52.C10]
ATGAAACCCAGTAACGCGCTTTATTCGATCTTGTTATTACTTTTATTGTCGGGCTGCAAAGCAAATGAGGATTCGTTAGA
AGACTTTGTTGTGCAAGTTGAGGCCAAGGCAAGGAAAGAGGTGGAACAGCTTGTTCCTGCCTCTGAGTTTGCTGCTGCCA
CTTATCAACGCCGAGCTTTTCGTCCTCCTTTTGAACTTCCTCAGGAAGCTATTGTGCAGAATCAACCTCTGGTTAAAAAA
AACTGTTGGCAGCCCAGTACTCGTGCTCGTAATGGAAAATTAGAAAAGTACCCGCTAAATCAGTTGCGTTTAAAAGGTGT
AATGGGAAGTGACTCAAGTGTATTTGGCCTTGTACAGACGCCTATAGGTAACGTTGTGAATGTTAAGAAAGGTCAGTTCA
TCGGCTTAAACAATGGTCGAGTTACCAAGGTAACAAGCCAGTACGTTCTGATTAATGAAACTCTTCCAGATGGCTTAGGT
TGTTGGCACAAGCGCAACGTTAGGCTGGCTCTGAAGTAA
ATGAAACCCAGTAACGCGCTTTATTCGATCTTGTTATTACTTTTATTGTCGGGCTGCAAAGCAAATGAGGATTCGTTAGA
AGACTTTGTTGTGCAAGTTGAGGCCAAGGCAAGGAAAGAGGTGGAACAGCTTGTTCCTGCCTCTGAGTTTGCTGCTGCCA
CTTATCAACGCCGAGCTTTTCGTCCTCCTTTTGAACTTCCTCAGGAAGCTATTGTGCAGAATCAACCTCTGGTTAAAAAA
AACTGTTGGCAGCCCAGTACTCGTGCTCGTAATGGAAAATTAGAAAAGTACCCGCTAAATCAGTTGCGTTTAAAAGGTGT
AATGGGAAGTGACTCAAGTGTATTTGGCCTTGTACAGACGCCTATAGGTAACGTTGTGAATGTTAAGAAAGGTCAGTTCA
TCGGCTTAAACAATGGTCGAGTTACCAAGGTAACAAGCCAGTACGTTCTGATTAATGAAACTCTTCCAGATGGCTTAGGT
TGTTGGCACAAGCGCAACGTTAGGCTGGCTCTGAAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilP | Vibrio cholerae strain A1552 |
63.19 |
94.767 |
0.599 |
| pilP | Vibrio campbellii strain DS40M4 |
55.689 |
97.093 |
0.541 |