Detailed information NTG1054601

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: BCU92_RS09560
• Genome accession: NZ_CP170017
• Coordinates: 2092165..2093169 (-)
• Length: 334 a.a.
• NCBI ID: WP_010435348.1
• Uniprot ID: A0AAN0LNA0
• Organism: Vibrio cyclitrophicus strain 10N.286.52.C10
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2087165..2098169

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BCU92_RS09530 (BCU92_09530)	zapB	2087335..2087577 (+)	243	WP_010435362.1	cell division protein ZapB	-
BCU92_RS09535 (BCU92_09535)	rraA	2087684..2088202 (-)	519	WP_010435359.1	ribonuclease E activity regulator RraA	-
BCU92_RS09540 (BCU92_09540)	-	2088276..2089193 (-)	918	WP_102291990.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
BCU92_RS09545 (BCU92_09545)	hslU	2089349..2090689 (-)	1341	WP_016767976.1	HslU--HslV peptidase ATPase subunit	-
BCU92_RS09550 (BCU92_09550)	hslV	2090748..2091296 (-)	549	WP_004729692.1	ATP-dependent protease subunit HslV	-
BCU92_RS09555 (BCU92_09555)	-	2091503..2092042 (-)	540	WP_010435351.1	SPOR domain-containing protein	-
BCU92_RS09560 (BCU92_09560)	cytR	2092165..2093169 (-)	1005	WP_010435348.1	DNA-binding transcriptional regulator CytR	Regulator
BCU92_RS09565 (BCU92_09565)	priA	2093410..2095611 (-)	2202	WP_102291989.1	primosomal protein N'	-
BCU92_RS09570 (BCU92_09570)	rpmE	2095941..2096159 (+)	219	WP_407834094.1	50S ribosomal protein L31	-
BCU92_RS09575 (BCU92_09575)	-	2096491..2097780 (+)	1290	WP_016798666.1	malic enzyme-like NAD(P)-binding protein	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 36507.05 Da
• Isoelectric Point: 6.4911

>NTDB_id=1054601 BCU92_RS09560 WP_010435348.1 2092165..2093169(-) (cytR) [Vibrio cyclitrophicus strain 10N.286.52.C10]
MATMKDVAQLAGVSTATVSRALMNPEKVSVSTRKRVEAAVLEAGYSPNTLARNLRRNESKTIITIVPDICDPYFAEIIRG
IEDAAVENDYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDHPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLAQLGHKRIAQISGPISATLCKFRQQGYQQALRRAGVSMNPAYSTVGDFTFEAGAQAVRQLLALPEQPTA
IFCHNDAMAIGAIQEAKKLGLRVPQDLSIVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLDLLKGNDVQAGSRLLE
AKLVVRGSTAPPRI

Nucleotide

• Length: 1005 bp

>NTDB_id=1054601 BCU92_RS09560 WP_010435348.1 2092165..2093169(-) (cytR) [Vibrio cyclitrophicus strain 10N.286.52.C10]
ATGGCGACAATGAAGGATGTTGCCCAGCTAGCAGGCGTCTCAACAGCAACGGTATCACGTGCATTGATGAACCCTGAAAA
AGTCTCTGTTTCTACTCGTAAGCGAGTCGAAGCGGCAGTGCTAGAAGCTGGATACTCACCCAACACATTAGCTAGAAACT
TACGTCGCAACGAATCAAAAACCATCATCACTATCGTTCCTGATATCTGTGACCCTTATTTTGCTGAAATCATTCGTGGT
ATCGAAGACGCCGCAGTAGAAAATGATTACCTTGTTCTACTGGGTGATAGCGGCCAGCAAAAGAAGCGCGAGTCTTCTTT
TGTTAACTTGGTTTTCACCAAGCAAGCTGACGGTATGCTGCTGCTTGGCACTGACCATCCGTTTGATGTCAGCAAGCCTG
AACAAAAGAATTTACCGCCGATGGTGATGGCATGTGAATTCGCCCCTGAGCTCGAATTACCGACAGTACACATCGATAAC
TTAACCTCTGCATTTGAAGCGGTTAACTACCTAGCCCAATTAGGTCATAAGCGTATCGCTCAAATATCTGGCCCAATATC
AGCGACACTGTGTAAATTCCGCCAACAAGGCTACCAACAAGCATTGCGCCGTGCGGGTGTATCAATGAACCCAGCTTATA
GCACGGTCGGTGACTTTACCTTTGAAGCTGGTGCTCAAGCGGTTCGTCAACTTCTAGCTCTGCCCGAGCAACCTACTGCT
ATTTTCTGTCATAACGATGCAATGGCGATTGGTGCGATTCAAGAAGCGAAGAAGCTAGGTTTACGCGTCCCTCAAGATTT
ATCAATTGTTGGCTTTGATGACATCCAATTCGCTCAATACTGCGATCCACCACTGACAACAATTTCTCAGCCTCGTTACG
AGATTGGACGTCAAGCCATGCTAATGATGCTTGATCTCCTTAAAGGTAACGATGTTCAAGCTGGTTCACGTCTGCTTGAA
GCTAAACTCGTGGTTCGAGGCAGTACTGCACCACCGCGAATTTAA

Domains

Predicted by InterproScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-329)

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	89.759	99.401	0.892
cytR	Vibrio parahaemolyticus RIMD 2210633	87.688	99.701	0.874