Detailed information NTG1054579

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: BCU99_RS14270
• Genome accession: NZ_CP170015
• Coordinates: 3158631..3159635 (+)
• Length: 334 a.a.
• NCBI ID: WP_010435348.1
• Uniprot ID: A0AAN0LNA0
• Organism: Vibrio cyclitrophicus strain 10N.286.52.F6
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3153631..3164635

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BCU99_RS14255 (BCU99_14255)	-	3154018..3155307 (-)	1290	WP_016790179.1	malic enzyme-like NAD(P)-binding protein	-
BCU99_RS14260 (BCU99_14260)	rpmE	3155639..3155857 (-)	219	WP_407834094.1	50S ribosomal protein L31	-
BCU99_RS14265 (BCU99_14265)	priA	3156189..3158390 (+)	2202	WP_016767977.1	primosomal protein N'	-
BCU99_RS14270 (BCU99_14270)	cytR	3158631..3159635 (+)	1005	WP_010435348.1	DNA-binding transcriptional regulator CytR	Regulator
BCU99_RS14275 (BCU99_14275)	-	3159758..3160297 (+)	540	WP_010435351.1	SPOR domain-containing protein	-
BCU99_RS14280 (BCU99_14280)	hslV	3160504..3161052 (+)	549	WP_004729692.1	ATP-dependent protease subunit HslV	-
BCU99_RS14285 (BCU99_14285)	hslU	3161111..3162451 (+)	1341	WP_016767976.1	HslU--HslV peptidase ATPase subunit	-
BCU99_RS14290 (BCU99_14290)	-	3162607..3163524 (+)	918	WP_010435357.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
BCU99_RS14295 (BCU99_14295)	rraA	3163598..3164116 (+)	519	WP_010435359.1	ribonuclease E activity regulator RraA	-
BCU99_RS14300 (BCU99_14300)	zapB	3164223..3164465 (-)	243	WP_010435362.1	cell division protein ZapB	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 36507.05 Da
• Isoelectric Point: 6.4911

>NTDB_id=1054579 BCU99_RS14270 WP_010435348.1 3158631..3159635(+) (cytR) [Vibrio cyclitrophicus strain 10N.286.52.F6]
MATMKDVAQLAGVSTATVSRALMNPEKVSVSTRKRVEAAVLEAGYSPNTLARNLRRNESKTIITIVPDICDPYFAEIIRG
IEDAAVENDYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDHPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLAQLGHKRIAQISGPISATLCKFRQQGYQQALRRAGVSMNPAYSTVGDFTFEAGAQAVRQLLALPEQPTA
IFCHNDAMAIGAIQEAKKLGLRVPQDLSIVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLDLLKGNDVQAGSRLLE
AKLVVRGSTAPPRI

Nucleotide

• Length: 1005 bp

>NTDB_id=1054579 BCU99_RS14270 WP_010435348.1 3158631..3159635(+) (cytR) [Vibrio cyclitrophicus strain 10N.286.52.F6]
ATGGCGACAATGAAGGATGTTGCCCAGCTAGCAGGCGTCTCAACAGCAACGGTATCACGTGCATTGATGAACCCTGAAAA
AGTCTCTGTTTCTACTCGTAAGCGAGTCGAAGCGGCAGTGCTAGAAGCTGGATACTCACCCAACACATTAGCTAGAAACT
TACGTCGCAACGAATCAAAAACCATCATCACTATCGTTCCTGATATCTGTGACCCTTATTTTGCTGAAATCATTCGTGGT
ATCGAAGACGCCGCAGTAGAAAATGATTACCTTGTTCTACTGGGTGATAGCGGCCAGCAAAAGAAGCGCGAGTCTTCTTT
TGTTAACTTGGTTTTCACCAAGCAAGCTGACGGTATGCTGCTGCTTGGCACTGACCATCCGTTTGATGTCAGCAAGCCTG
AACAAAAGAATTTACCGCCGATGGTGATGGCATGTGAATTCGCCCCTGAGCTTGAATTACCGACAGTACACATCGATAAC
TTAACCTCTGCATTTGAAGCGGTTAACTACCTAGCCCAATTAGGTCATAAGCGTATCGCTCAAATATCTGGCCCAATATC
AGCGACACTGTGTAAATTCCGCCAACAAGGCTACCAACAAGCATTGCGCCGTGCGGGTGTATCAATGAACCCAGCTTATA
GCACGGTCGGTGACTTTACCTTTGAAGCTGGTGCTCAAGCGGTTCGTCAACTTCTAGCTCTGCCCGAGCAACCTACTGCT
ATTTTCTGTCATAACGATGCAATGGCGATTGGTGCGATTCAAGAAGCGAAGAAGCTAGGTTTACGCGTCCCTCAAGATTT
ATCAATTGTTGGCTTTGATGACATCCAATTCGCTCAATACTGCGATCCACCACTGACAACAATTTCTCAGCCTCGTTACG
AGATTGGACGTCAAGCCATGCTAATGATGCTTGATCTCCTTAAAGGTAACGATGTTCAAGCTGGTTCACGTCTGCTTGAA
GCTAAACTCGTGGTTCGAGGCAGTACTGCACCACCGCGAATTTAA

Domains

Predicted by InterproScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-329)

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	89.759	99.401	0.892
cytR	Vibrio parahaemolyticus RIMD 2210633	87.688	99.701	0.874