Detailed information    

insolico Bioinformatically predicted

Overview


Name   luxP   Type   Regulator
Locus tag   BCV09_RS15750 Genome accession   NZ_CP170014
Coordinates   102430..103524 (+) Length   364 a.a.
NCBI ID   WP_010428642.1    Uniprot ID   A0AAN0LXX0
Organism   Vibrio cyclitrophicus strain 10N.286.54.C7     
Function   autoinducer sensor (predicted from homology)   
Competence regulation

Genomic Context


Location: 97430..108524
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BCV09_RS15720 (BCV09_15720) - 99174..99410 (-) 237 WP_016794946.1 hypothetical protein -
  BCV09_RS15725 (BCV09_15725) - 99580..100206 (-) 627 WP_016794948.1 D-Ala-D-Ala carboxypeptidase family metallohydrolase -
  BCV09_RS15730 (BCV09_15730) - 100377..100691 (-) 315 WP_004730049.1 DUF496 family protein -
  BCV09_RS15735 (BCV09_15735) - 100887..101087 (+) 201 WP_016769134.1 hypothetical protein -
  BCV09_RS15740 (BCV09_15740) - 101152..101808 (+) 657 WP_016794467.1 YceH family protein -
  BCV09_RS15745 (BCV09_15745) - 101809..102123 (+) 315 WP_010428640.1 GIY-YIG nuclease family protein -
  BCV09_RS15750 (BCV09_15750) luxP 102430..103524 (+) 1095 WP_010428642.1 autoinducer 2-binding periplasmic protein LuxP Regulator
  BCV09_RS15755 (BCV09_15755) luxQ 103524..106091 (+) 2568 WP_102402160.1 quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ -
  BCV09_RS15760 (BCV09_15760) - 106198..106857 (-) 660 WP_102402161.1 PilZ domain-containing protein -
  BCV09_RS15765 (BCV09_15765) - 107052..107402 (+) 351 WP_010428650.1 HopJ type III effector protein -
  BCV09_RS15770 (BCV09_15770) - 107490..107798 (-) 309 WP_080572691.1 DUF1289 domain-containing protein -

Sequence


Protein


Download         Length: 364 a.a.        Molecular weight: 41365.75 Da        Isoelectric Point: 6.0023

>NTDB_id=1054535 BCV09_RS15750 WP_010428642.1 102430..103524(+) (luxP) [Vibrio cyclitrophicus strain 10N.286.54.C7]
MKRLLMLFGLAVFSASALSHGTRVLNGYWEYQDYLAKFPEQKALTDKMVEAVQNHPVPLKRAQDRPITISVVYPGQQISD
YWVRNIQAFEKRLDRLRINYQINQVFTRVNADISQQSISLQEAIENKTDYLIFTLDTTRHRKFIEHVLSSTDTKLILQNI
TTPVRAWADRQPFMYVGFDHATGSLKLADYFKQVTPPNSKYSVLYRSEGYISDARGDTFIHDVNTDTNFDLKSSFYTKSD
KESGYQAAKISIANNKDLDFIYACATDVALGAVEAIRESRKDILINGWGGGSAELEAIERGDLDVTVMRMNDDTGIAMAE
AIKWDLAGLEVPTVYSGEFEVVTKEDSPERISELKKRAFRYSGQ

Nucleotide


Download         Length: 1095 bp        

>NTDB_id=1054535 BCV09_RS15750 WP_010428642.1 102430..103524(+) (luxP) [Vibrio cyclitrophicus strain 10N.286.54.C7]
ATGAAACGTTTATTGATGTTGTTTGGACTTGCCGTATTTTCTGCGTCCGCTCTCTCCCACGGTACCCGTGTCCTCAATGG
GTATTGGGAATACCAGGATTATCTTGCTAAATTTCCAGAACAAAAAGCGCTGACGGATAAGATGGTCGAAGCTGTACAAA
ACCACCCCGTGCCATTAAAGCGAGCTCAAGATAGACCGATCACAATTTCTGTTGTTTACCCTGGCCAACAGATCTCCGAT
TATTGGGTCCGAAATATCCAAGCCTTTGAGAAACGTCTCGACAGGTTAAGAATTAATTACCAAATAAACCAAGTGTTTAC
TCGTGTCAATGCGGATATATCTCAGCAGAGTATTTCTTTGCAAGAGGCGATTGAAAACAAGACGGATTACTTAATTTTTA
CGCTAGATACAACTCGACACCGTAAATTTATTGAGCATGTATTGAGCTCTACGGATACCAAGTTGATCCTGCAAAACATC
ACCACTCCAGTACGTGCGTGGGCAGACAGGCAGCCATTTATGTATGTGGGTTTTGACCATGCAACAGGCAGCTTGAAGTT
GGCGGACTATTTTAAACAAGTGACACCTCCTAACAGTAAGTACTCGGTTCTATATCGTTCAGAGGGCTACATTAGTGATG
CTCGTGGCGATACCTTTATCCATGATGTAAACACCGATACTAATTTTGATCTCAAGTCTTCTTTCTACACTAAATCAGAT
AAGGAAAGTGGTTACCAGGCAGCTAAAATCAGCATTGCGAACAATAAGGATCTAGACTTTATCTATGCATGTGCAACTGA
TGTCGCTCTAGGTGCTGTAGAAGCGATTCGTGAGTCGCGTAAAGATATCTTAATTAATGGCTGGGGAGGCGGTTCTGCTG
AACTTGAAGCGATTGAGAGAGGTGACTTAGATGTTACTGTCATGCGAATGAATGACGATACGGGTATTGCGATGGCAGAA
GCTATCAAATGGGACCTTGCTGGGTTGGAAGTTCCTACCGTTTATTCTGGTGAGTTCGAAGTTGTCACCAAAGAAGACTC
TCCAGAACGTATTTCAGAACTTAAGAAGCGTGCATTTAGGTACTCAGGCCAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxP Vibrio cholerae strain A1552

63.934

100

0.643


Multiple sequence alignment