Detailed information NTG1054494

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: BCV09_RS00785
• Genome accession: NZ_CP170013
• Coordinates: 169751..170755 (-)
• Length: 334 a.a.
• NCBI ID: WP_102402065.1
• Uniprot ID: -
• Organism: Vibrio cyclitrophicus strain 10N.286.54.C7
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 164751..175755

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BCV09_RS00755 (BCV09_00755)	zapB	164921..165163 (+)	243	WP_010435362.1	cell division protein ZapB	-
BCV09_RS00760 (BCV09_00760)	rraA	165270..165788 (-)	519	WP_046209436.1	ribonuclease E activity regulator RraA	-
BCV09_RS00765 (BCV09_00765)	-	165862..166779 (-)	918	WP_010435357.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
BCV09_RS00770 (BCV09_00770)	hslU	166935..168275 (-)	1341	WP_016767976.1	HslU--HslV peptidase ATPase subunit	-
BCV09_RS00775 (BCV09_00775)	hslV	168334..168882 (-)	549	WP_004729692.1	ATP-dependent protease subunit HslV	-
BCV09_RS00780 (BCV09_00780)	-	169089..169628 (-)	540	WP_010435351.1	SPOR domain-containing protein	-
BCV09_RS00785 (BCV09_00785)	cytR	169751..170755 (-)	1005	WP_102402065.1	DNA-binding transcriptional regulator CytR	Regulator
BCV09_RS00790 (BCV09_00790)	priA	170996..173197 (-)	2202	WP_016767977.1	primosomal protein N'	-
BCV09_RS00795 (BCV09_00795)	rpmE	173529..173747 (+)	219	WP_004737142.1	50S ribosomal protein L31	-
BCV09_RS00800 (BCV09_00800)	-	174079..175368 (+)	1290	WP_016790179.1	malic enzyme-like NAD(P)-binding protein	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 36525.09 Da
• Isoelectric Point: 6.4911

>NTDB_id=1054494 BCV09_RS00785 WP_102402065.1 169751..170755(-) (cytR) [Vibrio cyclitrophicus strain 10N.286.54.C7]
MATMKDVAQLAGVSTATVSRALMNPEKVSVSTRKRVEAAVLEAGYSPNTLARNLRRNESKTIITIVPDICDPYFAEIIRG
IEDAAVENDYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDHPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLAQLGHKRIAQISGPISATLCKFRQQGYQQALRRAGVSMNPAYSTVGDFTFEAGAQAVRQLLALPEQPTA
IFCHNDAMAIGAIQEAKKLGLRVPQDLSIVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLDLLKGNDVQAGSRLLE
AKLVVRGSTAPPRM

Nucleotide

• Length: 1005 bp

>NTDB_id=1054494 BCV09_RS00785 WP_102402065.1 169751..170755(-) (cytR) [Vibrio cyclitrophicus strain 10N.286.54.C7]
ATGGCGACAATGAAGGATGTTGCCCAGCTAGCAGGCGTCTCAACAGCAACGGTATCACGTGCATTGATGAACCCTGAAAA
AGTCTCTGTTTCTACTCGTAAGCGAGTCGAAGCGGCAGTGCTAGAAGCTGGATACTCACCCAACACATTAGCTAGAAACT
TACGTCGCAACGAATCAAAAACCATCATCACTATCGTTCCTGATATCTGTGACCCTTATTTTGCTGAAATCATTCGTGGT
ATCGAAGACGCCGCAGTAGAAAATGATTACCTTGTTCTACTGGGTGATAGCGGCCAGCAAAAGAAGCGCGAGTCTTCTTT
TGTTAACTTGGTTTTCACCAAGCAAGCTGACGGTATGCTGCTGCTTGGCACTGACCATCCGTTTGATGTCAGCAAGCCTG
AACAAAAGAATTTACCGCCGATGGTGATGGCATGTGAATTCGCCCCTGAGCTCGAATTACCGACAGTACACATCGATAAC
TTAACCTCTGCATTTGAAGCGGTTAACTACCTAGCCCAATTAGGTCATAAGCGTATCGCTCAAATATCTGGCCCAATATC
AGCGACACTGTGTAAATTCCGCCAACAAGGCTACCAACAAGCATTGCGCCGTGCGGGTGTATCAATGAACCCAGCTTATA
GCACGGTCGGTGACTTTACCTTTGAAGCTGGTGCTCAAGCGGTTCGTCAATTACTTGCACTTCCTGAACAACCTACAGCG
ATCTTCTGTCATAACGATGCGATGGCGATTGGTGCGATTCAAGAAGCGAAGAAGCTAGGTTTACGTGTTCCTCAAGACCT
ATCGATTGTTGGCTTCGATGACATCCAATTCGCTCAATACTGCGATCCACCGCTAACCACTATTTCTCAGCCTCGTTATG
AGATTGGACGCCAAGCGATGTTGATGATGCTTGATCTATTGAAGGGCAACGATGTGCAAGCAGGTTCGCGTCTGCTTGAA
GCTAAATTAGTCGTTAGAGGCAGCACCGCACCACCTCGAATGTAA

Domains

Predicted by InterproScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-329)

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	89.759	99.401	0.892
cytR	Vibrio parahaemolyticus RIMD 2210633	87.688	99.701	0.874