Detailed information NTG1054488

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: BCV14_RS14585
• Genome accession: NZ_CP170011
• Coordinates: 3252538..3253542 (+)
• Length: 334 a.a.
• NCBI ID: WP_010435348.1
• Uniprot ID: A0AAN0LNA0
• Organism: Vibrio cyclitrophicus strain 10N.286.54.E4
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3247538..3258542

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BCV14_RS14570 (BCV14_14570)	-	3247925..3249214 (-)	1290	WP_016783694.1	malic enzyme-like NAD(P)-binding protein	-
BCV14_RS14575 (BCV14_14575)	rpmE	3249546..3249764 (-)	219	WP_004737142.1	50S ribosomal protein L31	-
BCV14_RS14580 (BCV14_14580)	priA	3250096..3252297 (+)	2202	WP_010435346.1	primosomal protein N'	-
BCV14_RS14585 (BCV14_14585)	cytR	3252538..3253542 (+)	1005	WP_010435348.1	DNA-binding transcriptional regulator CytR	Regulator
BCV14_RS14590 (BCV14_14590)	-	3253665..3254204 (+)	540	WP_010435351.1	SPOR domain-containing protein	-
BCV14_RS14595 (BCV14_14595)	hslV	3254411..3254959 (+)	549	WP_004729692.1	ATP-dependent protease subunit HslV	-
BCV14_RS14600 (BCV14_14600)	hslU	3255018..3256358 (+)	1341	WP_016767976.1	HslU--HslV peptidase ATPase subunit	-
BCV14_RS14605 (BCV14_14605)	-	3256514..3257431 (+)	918	WP_010435357.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
BCV14_RS14610 (BCV14_14610)	rraA	3257505..3258023 (+)	519	WP_010435359.1	ribonuclease E activity regulator RraA	-
BCV14_RS14615 (BCV14_14615)	zapB	3258130..3258372 (-)	243	WP_010435362.1	cell division protein ZapB	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 36507.05 Da
• Isoelectric Point: 6.4911

>NTDB_id=1054488 BCV14_RS14585 WP_010435348.1 3252538..3253542(+) (cytR) [Vibrio cyclitrophicus strain 10N.286.54.E4]
MATMKDVAQLAGVSTATVSRALMNPEKVSVSTRKRVEAAVLEAGYSPNTLARNLRRNESKTIITIVPDICDPYFAEIIRG
IEDAAVENDYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDHPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLAQLGHKRIAQISGPISATLCKFRQQGYQQALRRAGVSMNPAYSTVGDFTFEAGAQAVRQLLALPEQPTA
IFCHNDAMAIGAIQEAKKLGLRVPQDLSIVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLDLLKGNDVQAGSRLLE
AKLVVRGSTAPPRI

Nucleotide

• Length: 1005 bp

>NTDB_id=1054488 BCV14_RS14585 WP_010435348.1 3252538..3253542(+) (cytR) [Vibrio cyclitrophicus strain 10N.286.54.E4]
ATGGCGACAATGAAGGATGTTGCCCAGCTAGCAGGCGTCTCAACAGCAACGGTATCACGTGCATTGATGAACCCTGAAAA
AGTCTCTGTTTCTACTCGTAAGCGAGTCGAAGCGGCAGTGCTAGAAGCTGGATACTCACCCAACACATTAGCTAGAAACT
TACGTCGCAACGAATCAAAAACCATCATCACTATCGTTCCTGATATCTGTGACCCTTATTTTGCTGAAATCATTCGTGGT
ATCGAAGACGCCGCAGTAGAAAATGATTACCTTGTTCTACTGGGTGATAGCGGCCAGCAAAAGAAGCGCGAGTCTTCTTT
TGTTAACTTGGTTTTCACCAAGCAAGCTGACGGTATGCTGCTGCTCGGCACTGACCATCCGTTTGATGTCAGCAAGCCTG
AACAAAAGAATTTACCGCCGATGGTGATGGCATGTGAATTCGCCCCTGAGCTCGAATTACCGACAGTACACATCGATAAC
TTAACCTCTGCATTTGAAGCGGTTAACTACCTAGCCCAATTAGGTCATAAGCGTATCGCTCAAATATCTGGCCCAATATC
AGCGACACTGTGTAAATTCCGCCAACAAGGCTACCAACAAGCATTGCGCCGTGCGGGTGTATCAATGAACCCAGCTTATA
GCACGGTCGGTGACTTTACCTTTGAAGCTGGTGCTCAAGCGGTTCGTCAACTTCTAGCTCTGCCCGAGCAACCTACTGCT
ATTTTCTGTCATAACGATGCAATGGCGATTGGTGCGATTCAAGAAGCGAAGAAGCTAGGTTTACGCGTCCCTCAAGATTT
ATCAATTGTTGGCTTTGATGACATCCAATTCGCTCAATACTGCGATCCACCACTGACAACAATTTCTCAGCCTCGTTACG
AGATTGGACGTCAAGCCATGCTAATGATGCTTGATCTCCTTAAAGGTAACGATGTTCAAGCTGGTTCACGTCTGCTTGAA
GCTAAACTCGTGGTTCGAGGCAGTACTGCACCACCGCGAATTTAA

Domains

Predicted by InterproScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-329)

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	89.759	99.401	0.892
cytR	Vibrio parahaemolyticus RIMD 2210633	87.688	99.701	0.874